Rapid and sensitive single-sample viral metagenomics using Nanopore Flongle sequencing-Reference-Cited by-同舟云学术

Rapid and sensitive single-sample viral metagenomics using Nanopore Flongle sequencing

Published:2023-10 Issue: Volume:320 Page:114784
ISSN:0166-0934
Container-title:Journal of Virological Methods
language:en
Short-container-title:Journal of Virological Methods

Author:

Pichler Ian^ORCID,Schmutz Stefan,Ziltener Gabriela,Zaheri Maryam,Kufner Verena,Trkola Alexandra,Huber Michael^ORCID

Funder

Universität Zürich

Publisher

Elsevier BV

Subject

Virology

Reference48 articles.

1. Nanopore metagenomics enables rapid clinical diagnosis of bacterial lower respiratory infection;Charalampous;Nat. Biotechnol.,2019

2. Clinical metagenomics;Chiu;Nat. Rev. Genet,2019

3. Rapid viral metagenomics using SMART-9N amplification and nanopore sequencing [version 1; peer review: 2 approved with reservations];Claro;Wellcome Open Res.,2021

4. Astrovirus MLB2, a new gastroenteric virus associated with meningitis and disseminated infection;Cordey;Emerg. Infect. Dis.,2016

5. Twelve years of SAMtools and BCFtools;Danecek;Gigascience,2021

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