Rapid whole-genome based typing and surveillance of avipoxviruses using nanopore sequencing

Author:

Croville Guillaume,Le Loc’h Guillaume,Zanchetta Catherine,Manno Maxime,Camus-Bouclainville Christelle,Klopp ChristopheORCID,Delverdier Maxence,Lucas Marie-Noëlle,Donnadieu Cécile,Delpont MattiasORCID,Guérin Jean-Luc

Funder

French National Research Agency

Publisher

Elsevier BV

Subject

Virology

Reference25 articles.

1. Unique genomic organization of a novel Avipoxvirus detected in turkey (Meleagris gallopavo);Bányai;Infect. Genet. Evol. J. Mol. Epidemiol. Evol. Genet. Infect. Dis.,2015

2. Comparison of the consensus sequence flanking translational start sites in Drosophila and vertebrates;Cavener;Nucleic Acids Res.,1987

3. Mapping single molecule sequencing reads using basic local alignment with successive refinement (BLASR): application and theory;Chaisson;BMC Bioinf.,2012

4. Recovery of the first full-length genome sequence of a parapoxvirus directly from a clinical sample;Günther;Sci. Rep.,2017

5. Worldwide phylogenetic relationship of avian poxviruses;Gyuranecz;J. Virol.,2013

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