Scraping the bottom of the barrel: are rare high throughput sequences artifacts?

Author:

Brown Shawn P.,Veach Allison M.,Rigdon-Huss Anne R.,Grond Kirsten,Lickteig Spencer K.,Lothamer Kale,Oliver Alena K.,Jumpponen Ari

Funder

NSF GK-12 Fellowship

KABB

DOE-BER

Publisher

Elsevier BV

Subject

Plant Science,Ecological Modeling,Ecology,Ecology, Evolution, Behavior and Systematics

Reference27 articles.

1. Improved software detection and extraction of ITS1 and ITS2 from ribosomal ITS sequences of fungi and other eukaryotes for analysis of environmental sequencing data;Bengtsson-Palme;Methods in Ecology and Evolution,2013

2. Analyses of ITS and LSU gene regions provide congruent results on fungal community responses;Brown;Fungal Ecology,2014

3. 454 Pyrosequencing analyses of forest soils reveal an unexpectedly high fungal diversity;Buée;New Phytologist,2009

4. Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms;Caporaso;The ISME Journal,2012

5. DNA polymerase fidelity and the polymerase chain reaction;Eckert;Genome Research,1991

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