Evaluation of nanopore sequencing technology to identify Salmonella enterica Choleraesuis var. Kunzendorf and Orion var. 15+, 34+-Reference-Cited by-同舟云学术

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Evaluation of nanopore sequencing technology to identify Salmonella enterica Choleraesuis var. Kunzendorf and Orion var. 15+, 34+

Published:2021-05 Issue: Volume:346 Page:109167
ISSN:0168-1605
Container-title:International Journal of Food Microbiology
language:en
Short-container-title:International Journal of Food Microbiology

Author:

Xu Feng,Ge Chongtao,Li Shaoting,Tang Silin,Wu Xingwen,Luo Hao,Deng Xiangyu,Zhang Guangtao,Stevenson Abigail,Baker Robert C.

Funder

Oxford Nanopore Technologies

Publisher

Elsevier BV

Subject

General Medicine,Microbiology,Food Science

Reference76 articles.

1. Potential associations between fecal shedding of Salmonella in feedlot cattle treated for apparent respiratory disease and subsequent adverse health outcomes;Alam;Vet. Res.,2009

2. Opportunities and challenges in long-read sequencing data analysis;Amarasinghe;Genome Biol.,2020

3. PHASTER: a better, faster version of the PHAST phage search tool;Arndt;Nucleic Acids Res.,2016

4. Genome-based Salmonella serotyping as the new gold standard;Banerji;Sci. Rep.,2020

5. SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing;Bankevich;J. Comput. Biol.,2012

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2. The Lytic Activity of Bacteriophage ZCSE9 against Salmonella enterica and Its Synergistic Effects with Kanamycin;Viruses;2023-03-31

3. Evaluation of multiplex nanopore sequencing for Salmonella serotype prediction and antimicrobial resistance gene and virulence gene detection;Frontiers in Microbiology;2023-02-01

4. Sequoia: A Framework for Visual Analysis of RNA Modifications from Direct RNA Sequencing Data;Methods in Molecular Biology;2023

5. Effect of sub-minimum inhibitory concentration of ceftriaxone on the expression of outer membrane proteins in Salmonella enterica serovar Typhi;World Journal of Microbiology and Biotechnology;2022-08-16

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