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New tabulation and sparse dynamic programming based techniques for sequence similarity problems

  • Published:2016-10 Issue: Volume:212 Page:96-103
  • ISSN:0166-218X
  • Container-title:Discrete Applied Mathematics
  • language:en
  • Short-container-title:Discrete Applied Mathematics

Author:

Grabowski Szymon

Publisher

Elsevier BV

Subject

Applied Mathematics,Discrete Mathematics and Combinatorics

Reference21 articles.

1. String editing and longest common subsequences;Apostolico,1997

2. A survey of longest common subsequence algorithms;Bergroth,2000

3. Fast and compact regular expression matching;Bille;Theoret. Comput. Sci.,2008

4. A subquadratic sequence alignment algorithm for unrestricted scoring matrices;Crochemore;SIAM J. Comput.,2003

5. Speeding up transposition-invariant string matching;Deorowicz;Inform. Process. Lett.,2006

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