Taming the complexity of biochemical models through bisimulation and collapsing: theory and practice

Author:

Antoniotti M.,Piazza C.,Policriti A.,Simeoni M.,Mishra B.

Publisher

Elsevier BV

Subject

General Computer Science,Theoretical Computer Science

Reference39 articles.

1. R. Alur, C. Belta, F. Ivancic, V. Kumar, M. Mintz, G.J. Pappas, H. Rubin, J. Schug, Hybrid modeling and simulation of biomolecular networks, in: M.D. Di Benedetto, A.L. Sangiovanni-Vincentelli (Eds.), Hybrid Systems: Computation and Control, Lecture Notes in Computer Science, Vol. 2034, Springer, Berlin, pp. 19–32.

2. Hybrid automata: an algorithmic approach to the specification and verification of hybrid systems;Alur,1992

3. M. Antoniotti, A. Göllü, SHIFT and SMART-AHS: a language for hybrid systems engineering, modeling, and simulation, in: Conference on Domain Specific Languages, Santa Barbara, CA, USA, October 1997, USENIX.

4. M. Antoniotti, F.C. Park, A. Policriti, N. Ugel, B. Mishra, Foundations of a query and simulation system for the modeling of biochemical and biological processes, in: Proc. Pacific Symp. of Biocomputing (PSB’03), 2003.

5. M. Antoniotti, A. Policriti, N. Ugel, B. Mishra, XS-systems: extended S-systems and algebraic differential automata for modeling cellular behaviour, in: Proc. of Internat. Conf. on High Performance Computing (HiPC’02), 2002.

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