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A graph-based approach to analyze flux-balanced pathways in metabolic networks

  • Published:2018-03 Issue: Volume:165 Page:40-51
  • ISSN:0303-2647
  • Container-title:Biosystems
  • language:en
  • Short-container-title:Biosystems

Author:

Arabzadeh Mona,Saheb Zamani Morteza,Sedighi Mehdi,Marashi Sayed-Amir

Publisher

Elsevier BV

Subject

Applied Mathematics,General Biochemistry, Genetics and Molecular Biology,Modeling and Simulation,General Medicine,Statistics and Probability

Reference38 articles.

1. Modes and cuts in metabolic networks: complexity and algorithms;Acuña;Biosystems,2009

2. A note on the complexity of finding and enumerating elementary modes;Acuña;Biosystems,2010

3. Minimal reaction sets for Escherichia coli metabolism under different growth requirements and uptake environments;Burgard;Biotechnol. Prog.,2001

4. A new approach to obtain EFMs using graph methods based on the shortest path between end nodes;Céspedes,2015

5. Computing elementary flux modes involving a set of target reactions;David;IEEE/ACM Trans. Comput. Biol. Bioinf.,2014

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