Phage hunters: Computational strategies for finding phages in large-scale ‘omics datasets
Author:
Funder
National Science Foundation
Publisher
Elsevier BV
Subject
Cancer Research,Infectious Diseases,Virology
Reference64 articles.
1. Alignment-free oligonucleotide frequency dissimilarity measure improves prediction of hosts from metagenomically-derived viral sequences;Ahlgren;Nucleic Acids Res.,2016
2. PhiSpy: a novel algorithm for finding prophages in bacterial genomes that combines similarity- and composition-based strategies;Akhter;Nucleic Acids Res.,2012
3. PHASTER: a better, faster version of the PHAST phage search tool;Arndt;Nucleic Acids Res.,2016
4. PHAST, PHASTER and PHASTEST: Tools for finding prophage in bacterial genomes;Arndt;Brief. Bioinfo.,2017
5. A comparative evaluation of sequence classification programs;Bazinet;BMC Bioinf.,2012
Cited by 25 articles. 订阅此论文施引文献 订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献
1. An extended catalog of integrated prophages in the infant and adult fecal microbiome shows high prevalence of lysogeny;Frontiers in Microbiology;2023-09-05
2. Inference of the Life Cycle of Environmental Phages from Genomic Signature Distances to Their Hosts;Viruses;2023-05-19
3. Phylogenic analysis of new viral cluster of large phages with unusual DNA genomes containing uracil in place of thymine in gene-sharing network, using phages S6 and PBS1 and relevant uncultured phages derived from sewage metagenomics;Virus Research;2022-10
4. Prophage Diversity Across Salmonella and Verotoxin-Producing Escherichia coli in Agricultural Niches of British Columbia, Canada;Frontiers in Microbiology;2022-07-22
5. Deploying Viruses against Phytobacteria: Potential Use of Phage Cocktails as a Multifaceted Approach to Combat Resistant Bacterial Plant Pathogens;Viruses;2022-01-18
1.学者识别学者识别
2.学术分析学术分析
3.人才评估人才评估
"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370
www.globalauthorid.com
TOP
Copyright © 2019-2024 北京同舟云网络信息技术有限公司 京公网安备11010802033243号 京ICP备18003416号-3