Cryo_fit: Democratization of flexible fitting for cryo-EM-Reference-Cited by-同舟云学术

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Cryo_fit: Democratization of flexible fitting for cryo-EM

Published:2019-10 Issue:1 Volume:208 Page:1-6
ISSN:1047-8477
Container-title:Journal of Structural Biology
language:en
Short-container-title:Journal of Structural Biology

Author:

Kim Doo Nam,Moriarty Nigel W.,Kirmizialtin Serdal,Afonine Pavel V.,Poon Billy,Sobolev Oleg V.,Adams Paul D.,Sanbonmatsu Karissa

Funder

NIH

NIGMS

US Department of Energy

Lawrence Berkeley National Laboratory

NSF

U.S. Department of Energy National Nuclear Security Administration

Publisher

Elsevier BV

Subject

Structural Biology

Reference65 articles.

1. PHENIX: A comprehensive Python-based system for macromolecular structure solution;Adams;Acta Crystallogr. Sect. D Biol. Crystallogr.,2010

2. Single-particle cryo-EM using alignment by classification (ABC): the structure of Lumbricus terrestris haemoglobin;Afanasyev;IUCrJ,2017

3. New tools for the analysis and validation of Cryo-EM maps and atomic models;Afonine;Acta Crystallogr. Sect. D Struct. Biol.,2018

4. Real-space refinement in Phenix for cryo-EM and crystallography;Afonine;Acta Crystallogr. Sect. D Struct. Biol.,2018

5. Consensus among flexible fitting approaches improves the interpretation of cryo-EM data;Ahmed;J. Struct. Biol.,2012

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2. Dissemination of pathogenic bacteria is reinforced by a MARTX toxin effector duet;Nature Communications;2024-07-23

3. CryoJAM: Automating Protein Homolog Fitting in Medium Resolution Cryo-EM Density Maps;2024-07-11

4. Single-particle Cryo-EM and molecular dynamics simulations: A perfect match;Current Opinion in Structural Biology;2024-06

5. Advancing cryo-electron microscopy data analysis through accelerated simulation-based flexible fitting approaches;Current Opinion in Structural Biology;2023-10

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