Abasy Atlas v2.2: The most comprehensive and up-to-date inventory of meta-curated, historical, bacterial regulatory networks, their completeness and system-level characterization-Reference-Cited by-同舟云学术

Abasy Atlas v2.2: The most comprehensive and up-to-date inventory of meta-curated, historical, bacterial regulatory networks, their completeness and system-level characterization

Published:2020 Issue: Volume:18 Page:1228-1237
ISSN:2001-0370
Container-title:Computational and Structural Biotechnology Journal
language:en
Short-container-title:Computational and Structural Biotechnology Journal

Author:

Escorcia-Rodríguez Juan M.,Tauch Andreas,Freyre-González Julio A.

Funder

Dirección General de Asuntos del Personal Académico, Universidad Nacional Autónoma de México

Publisher

Elsevier BV

Subject

Computer Science Applications,Genetics,Biochemistry,Structural Biology,Biophysics,Biotechnology

Reference59 articles.

1. Network biology: understanding the cell's functional organization;Barabasi;Nat Rev Genet,2004

2. Experimental strategies for studying transcription factor-DNA binding specificities;Geertz;Brief Funct Genomics,2010

3. RegulonDB version 9.0: high-level integration of gene regulation, coexpression, motif clustering and beyond;Gama-Castro;Nucleic Acids Res,2016

4. DBTBS: database of transcriptional regulation in Bacillus subtilis and its contribution to comparative genomics;Makita;Nucleic Acids Res,2004

5. SubtiWiki in 2018: from genes and proteins to functional network annotation of the model organism Bacillus subtilis;Zhu;Nucleic Acids Res,2018

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