High-throughput and cost-effective genotyping by low-coverage whole genome sequencing with genotype imputation in Pacific oyster, Crassostrea gigas-Reference-Cited by-同舟云学术

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High-throughput and cost-effective genotyping by low-coverage whole genome sequencing with genotype imputation in Pacific oyster, Crassostrea gigas

Published:2024-10 Issue: Volume:591 Page:741134
ISSN:0044-8486
Container-title:Aquaculture
language:en
Short-container-title:Aquaculture

Author:

Yang Ben,Li Yongjing,Li Qi,Liu Shikai

Funder

Key Technology Research and Development Program of Shandong Province

Earmarked Fund for China Agriculture Research System

National Natural Science Foundation of China

National Key Research and Development Program of China

Publisher

Elsevier BV

Reference43 articles.

1. Population genomics based on low coverage sequencing: how low should we go?;Alex Buerkle;Mol. Ecol.,2013

2. Rapid SNP discovery and genetic mapping using sequenced RAD markers;Baird;PloS One,2008

3. Haplotype genomic prediction of phenotypic values based on chromosome distance and gene boundaries using low-coverage sequencing in Duroc pigs;Bian;Genet. Sel. Evol.,2021

4. Rapid and accurate haplotype phasing and missing-data inference for whole-genome association studies by use of localized haplotype clustering;Browning;Am. J. Hum. Genet.,2007

5. A unified approach to genotype imputation and haplotype-phase inference for large data sets of trios and unrelated individuals;Browning;Am. J. Hum. Genet.,2009

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