Optimal choice of k-mer in composition vector method for genome sequence comparison

Author:

Das SubhramORCID,Deb Tamal,Dey Nilanjan,Ashour Amira S.,Bhattacharya D.K.,Tibarewala D.N.

Publisher

Elsevier BV

Subject

Genetics

Reference25 articles.

1. Alignment-free sequence comparison-a review;Vinga;Bioinformatics,2003

2. A novel graphical and numerical representation for analyzing DNA sequences based on codons, MATCH;Jafarzadeh;Commun. Math. Comput. Chem.,2012

3. 3D graphical representation of DNA sequence without degeneracy and its applications in constructing phylogenic tree;Liao;MATCH Commun. Math. Comput. Chem.,2006

4. A graphical representation of protein sequences for similarities analysis;Liu;MATCH Commun. Math. Comput. Chem.,2013

5. On 2D graphical representation of RNA secondary structure, MATCH Commun. Math;Zhang;Comput. Chem.,2007

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