HomBlocks: A multiple-alignment construction pipeline for organelle phylogenomics based on locally collinear block searching-Reference-Cited by-同舟云学术

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HomBlocks: A multiple-alignment construction pipeline for organelle phylogenomics based on locally collinear block searching

Published:2018-01 Issue:1 Volume:110 Page:18-22
ISSN:0888-7543
Container-title:Genomics
language:en
Short-container-title:Genomics

Author:

Bi Guiqi,Mao Yunxiang,Xing Qikun,Cao Min

Funder

National Natural Science Foundation of China

Qingdao National Laboratory for Marine Science and Technology

Project of National Infrastructure of Fishery Germplasm Resources

Fundamental Research Funds for the Central Universities

Publisher

Elsevier BV

Subject

Genetics

Reference15 articles.

1. BLAST ring image generator (BRIG): simple prokaryote genome comparisons;Alikhan;BMC Genomics,2011

2. Do orthologous gene phylogenies really support tree-thinking?;Bapteste;BMC Evol. Biol.,2005

3. Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis;Castresana;Mol. Biol. Evol.,2000

4. trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses;Capella-Gutiérrez;Bioinformatics,2009

5. Choosing the best genes for the job: the case for stationary genes in genome-scale phylogenetics;Collins;Syst. Biol.,2005

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