Finding exact hitting set solutions for systems biology applications using heterogeneous GPU clusters

Author:

Carastan-Santos Danilo,de Camargo Raphael Y.,Martins David C.,Song Siang W.,Rozante Luiz C.S.

Funder

UFABC, FAPESP

CNPq

Publisher

Elsevier BV

Subject

Computer Networks and Communications,Hardware and Architecture,Software

Reference20 articles.

1. Reversal Distance for Strings with Duplicates: Linear Time Approximation Using Hitting Set;Kolman,2007

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3. On the primer selection problem in polymerase chain reaction experiments;Pearson;Discrete Appl. Math.,1996

4. Discovery of regulatory interactions through perturbation: inference and experimental design;Ideker;Pac. Symp. Biocomput.,2000

5. A parallel solution to infer genetic network architectures in gene expression analysis;Ruchkys;Int. J. High Perform. Comput. Appl.,2003

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4. A hybrid CPU‐GPU‐MIC algorithm for minimal hitting set enumeration;Concurrency and Computation: Practice and Experience;2018-11-28

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