Streptomyces abietis sp. nov., a cellulolytic bacterium isolated from soil of a pine forest

Author:

Fujii Katsuhiko1,Satomi Masataka2,Fukui Youhei2,Matsunobu Shun1,Morifuku Youji3,Enokida Yuya1

Affiliation:

1. Faculty of Agriculture, Yamaguchi University, 1677-1 Yoshida, Yamaguchi 753-8515, Japan

2. National Research Institute of Fisheries Science, Fisheries Research Agency, Yokohama 236-8648, Japan

3. The Center for Instrumental Analysis, Yamaguchi University, 1677-1 Yoshida, Yamaguchi 753-8515, Japan

Abstract

Cellulolytic bacteria A191T, A192 and A193 isolated from the soil of Sakhalin fir forest in Hokkaido, Japan were studied phenotypically, genotypically and phylogenetically. Analysis of their 16S rRNA gene and gyrB sequences and DNA base composition suggested that these isolates were conspecific and members of the genus Streptomyces . However, levels of 16S rRNA gene and gyrB sequence similarity between the isolates and the type strains of their closest relatives in the genus Streptomyces were no higher than 97.9 and 95.0 %, respectively, implying that these isolates were distinctive. Moreover, the results of DNA−DNA hybridization experiments and physiological characterization clearly differentiated these isolates from their closest neighbours. It is therefore concluded that these isolates represent a novel species of the genus Streptomyces , for which the name Streptomyces abietis is proposed. The type strain is A191T ( = NBRC 109094T = DSM 42080T).

Funder

Japan Society for the Promotion of Science

Publisher

Microbiology Society

Subject

General Medicine,Ecology, Evolution, Behavior and Systematics,Microbiology

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