Pantoea coffeiphila sp. nov., cause of the ‘potato taste’ of Arabica coffee from the African Great Lakes region-Reference-Cited by-同舟云学术

Pantoea coffeiphila sp. nov., cause of the ‘potato taste’ of Arabica coffee from the African Great Lakes region

Published:2015-01-01 Issue:Pt_1 Volume:65 Page:23-29
ISSN:1466-5026
Container-title:International Journal of Systematic and Evolutionary Microbiology
language:en
Short-container-title:

Author:

Gueule Dominique¹,Fourny Gérard¹,Ageron Elisabeth²³,Le Flèche-Matéos Anne⁴³,Vandenbogaert Mathias⁴,Grimont Patrick A. D.³,Cilas Christian⁵

Affiliation:

1. CIRAD, UMR Qualisud, Montpellier, France

2. Unité de Pathogénie Microbienne Moléculaire, Institut Pasteur, Paris, France

3. Unité Biodiversité des Bactéries Pathogènes Emergentes, Institut Pasteur, Paris, France

4. Unité Environnement et Risques Infectieux, Cellule d’Intervention Biologique d’Urgence, Institut Pasteur, Paris, France

5. CIRAD, UR Bioagresseurs, Montpellier, France

Abstract

Six isolates recovered from coffee seeds giving off a potato-like flavour were studied. Gene sequencing (rrs and rpoB) showed they belong to the genus

Pantoea

. By DNA–DNA hybridization, the isolates constituted a genomic species with less than 17 % relatedness to 96 strains representing enterobacterial species. Multilocus sequence analysis (gyrB, rpoB, atpD and infB genes) showed the isolates to represent a discrete species of the genus

Pantoea

. Nutritional versatility of the novel species was poor. The novel species is proposed as Pantoea coffeiphila sp.nov. and its type strain is Ca04T ( = CIP 110718T = DSM 28482T).

Publisher

Microbiology Society

Subject

General Medicine,Ecology, Evolution, Behavior and Systematics,Microbiology

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