Oceanicola nanhaiensis sp. nov., isolated from sediments of the South China Sea

Author:

Gu Jun1,Guo Bin1,Wang Ya-Nan1,Yu Su-Lin1,Inamori Ryuhei2,Qu Ri1,Ye Yu-Guang3,Wu Xiao-Lei1

Affiliation:

1. Department of Environmental Science and Engineering, Tsinghua University, Beijing 100084, People's Republic of China

2. Graduate School of Life and Environmental Sciences, Tsukuba University, 1-1-1, Tennodai, Tsukuba 305-8572, Japan

3. Qingdao Institute of Marine Geology, Qingdao 266071, People's Republic of China

Abstract

A Gram-negative, non-motile, rod-shaped bacterium, strain SS011B1-20T, was isolated from sediments of the South China Sea. Growth occurred at NaCl concentrations between 0 and 10 % and at temperatures between 10 and 37 °C. Strain SS011B1-20T contained Q-10 as the major respiratory quinone and C18 : 1 ω7c (81.2 %), C16 : 0 (7.0 %) and C18 : 1 methyl (4.3 %) as the predominant fatty acids. The G+C content of the genomic DNA was 64.7 mol%. A phylogenetic analysis based on the 16S rRNA gene sequence indicated that strain SS011B1-20T belonged to a clade within the genus Oceanicola in the Alphaproteobacteria, the highest sequence similarities being found with respect to Oceanicola batsensis (96.3 %) and with Oceanicola granulosus (94.9 %). Strain SS011B1-20T could be clearly distinguished from other Oceanicola species on the basis of the genotypic, phenotypic and phylogenetic data. Thus, it is proposed that strain SS011B1-20T represents a novel species of the genus Oceanicola, with the name Oceanicola nanhaiensis sp. nov. The type strain is SS011B1-20T (=LMG 23508T=CGMCC 1.6293T).

Publisher

Microbiology Society

Subject

General Medicine,Ecology, Evolution, Behavior and Systematics,Microbiology

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