Chitinophaga cymbidii sp. nov., isolated from Cymbidium goeringii roots-Reference-Cited by-同舟云学术

Chitinophaga cymbidii sp. nov., isolated from Cymbidium goeringii roots

Published:2013-05-01 Issue:Pt_5 Volume:63 Page:1800-1804
ISSN:1466-5026
Container-title:International Journal of Systematic and Evolutionary Microbiology
language:en
Short-container-title:

Author:

Li Lubin¹,Sun Lei²,Shi Nan²,Liu Lin²,Guo Huijuan³,Xu Aifang²,Zhang Xiaoxia³,Yao Na¹

Affiliation:

1. State Key Laboratory of Tree Genetics and Breeding, Research Institute of Forestry, Chinese Academy of Forestry, Beijing 100091, PR China

2. College of Life Sciences, Hebei University, Baoding 071002, PR China

3. Agricultural Cultural Collection of China, Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences, Beijing 100081, PR China

Abstract

Two Gram-staining-negative, aerobic, non-spore-forming rod-shaped, non-motile bacteria, designated strains R156-2T and T58-2 were isolated from the roots of Cymbidium goeringii. The colonies were yellow-pigmented. On the basis of 16S rRNA gene sequence similarity, strains R156-2T and T58-2 were shown to be members of the genus

Chitinophaga

. Strains R156-2T and T58-2 showed the greatest level of sequence similarity with

Chitinophaga niabensis

(96.0–96.3 %). The major menaquinone was MK-7. The main cellular fatty acids were iso-C15 : 0, C16 : 1ω5c and iso-C17 : 0 3-OH. Phenotypic and genotypic analyses indicated that strains R156-2T and T58-2 could not be assigned to any recognized species. Therefore, strains R156-2T and T58-2 represent a novel species of the genus

Chitinophaga

, for which the name Chitinophaga cymbidii sp. nov. is proposed. The type strain is R156-2T ( = ACCC 05363T = KCTC 23738T). The DNA G+C content of this strain is 51.9 mol%.

Funder

Natural Science Foundation of Hebei

Forest Scientific and Technical Support Programme

Natural Science Foundation of China

Central Scientific Institution Basal Research Fund of China

Publisher

Microbiology Society

Subject

General Medicine,Ecology, Evolution, Behavior and Systematics,Microbiology

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