Pedobacter koreensis sp. nov., isolated from fresh water-Reference-Cited by-同舟云学术

Pedobacter koreensis sp. nov., isolated from fresh water

Published:2007-09-01 Issue:9 Volume:57 Page:2079-2083
ISSN:1466-5026
Container-title:International Journal of Systematic and Evolutionary Microbiology
language:en
Short-container-title:

Author:

Baik Keun Sik¹,Park Yoon-Dong²,Kim Mi Sun¹,Park Seong Chan¹,Moon Eun Young³,Rhee Moon Soo⁴,Choi Ji Hyeok⁵,Seong Chi Nam¹

Affiliation:

1. Department of Biology, College of Natural Sciences, Sunchon National University, Suncheon 540-742, Republic of Korea

2. Section of Infectious Diseases, Department of Medicine, University of Illinois at Chicago College of Medicine, Chicago, IL 60612-7302, USA

3. School of Biological Sciences, Seoul National University, Seoul 151-742, Republic of Korea

4. Korean Collection for Type Cultures, Korea Research Institute of Bioscience and Biotechnology, Daejeon 305-600, Republic of Korea

5. Paru Co. Ltd, Suncheon 540-742, Republic of Korea

Abstract

A motile, rod-shaped bacterium, designated strain WPCB189T, was isolated from fresh water collected from the Woopo wetland (Republic of Korea). The cells were found to be Gram-negative, aerobic and catalase- and oxidase-positive. A phylogenetic analysis based on 16S rRNA gene sequences showed that this isolate forms a lineage within the genus Pedobacter, showing sequence similarities of 89.7–96.4 % with respect to recognized species of the genus, and represents a novel member of this genus. The major fatty acids were iso-C15 : 0 2-OH and/or C16 : 1 ω7c (summed feature 3, 29.7 %), iso-C15 : 0 (26.4 %) and iso-C17 : 1 3-OH (10.1 %). The DNA G+C content was 38.0 mol%. On the basis of data obtained from this polyphasic taxonomic study, strain WPCB189T represents a novel species of the genus Pedobacter, for which the name Pedobacter koreensis sp. nov. is proposed. The type strain is WPCB189T (=KCTC 12536T=NBRC 101153T).

Publisher

Microbiology Society

Subject

General Medicine,Ecology, Evolution, Behavior and Systematics,Microbiology

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