Guidance for creating individual and batch latinized binomial virus species names

Author:

Postler Thomas S.1ORCID,Rubino Luisa2ORCID,Adriaenssens Evelien M.3ORCID,Dutilh Bas E.45ORCID,Harrach Balázs6ORCID,Junglen Sandra7ORCID,Kropinski Andrew M.8ORCID,Krupovic Mart9ORCID,Wada Jiro10ORCID,Crane Anya10,Kuhn Jens H.10ORCID,Mushegian Arcady11ORCID,Rūmnieks Jānis12,Sabanadzovic Sead13ORCID,Simmonds Peter14ORCID,Varsani Arvind1516ORCID,Zerbini F. Murilo17ORCID,Callanan Julie18ORCID,Draper Lorraine A.18ORCID,Hill Colin18ORCID,Stockdale Stephen R.18ORCID

Affiliation:

1. Department of Microbiology & Immunology, Vagelos College of Physicians & Surgeons, Columbia University Irving Medical Center, New York, NY 10032, USA

2. Consiglio Nazionale delle Ricerche, Istituto per la Protezione Sostenibile delle Piante, Sede Secondaria di Bari, 70126 Bari, Italy

3. Quadram Institute Bioscience, Norwich Research Park, Norwich, NR4 7UQ, UK

4. Theoretical Biology and Bioinformatics, Department of Biology, Utrecht University, 3584 CH Utrecht, Netherlands

5. Institute of Biodiversity, Faculty of Biological Sciences, Cluster of Excellence Balance of the Microverse, Friedrich Schiller University Jena, 07743 Jena, Germany

6. Veterinary Medical Research Institute, H-1143 Budapest, Hungary

7. Institute of Virology, Charité – Universitätsmedizin, corporate member of Free University Berlin, Humboldt-University Berlin, and Berlin Institute of Health, 10117 Berlin, Germany

8. Departments of Pathobiology, University of Guelph, Guelph, Ontario, N1G 2W1, Canada

9. Institut Pasteur, Université Paris Cité, CNRS UMR6047, Archaeal Virology Unit, 75015 Paris, France

10. Integrated Research Facility at Fort Detrick, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Frederick, MD 21702, USA

11. Division of Molecular and Cellular Biosciences, National Science Foundation, Alexandria, VA 22314, USA

12. Latvian Biomedical Research and Study Centre, Riga, LV-1067, Latvia

13. Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Mississippi State, MS 39762, USA

14. Nuffield Department of Experimental Medicine, University of Oxford, Peter Medawar Building, Oxford, OX1 3SY, UK

15. Structural Biology Research Unit, Department of Integrative Biomedical Sciences, University of Cape Town, Cape Town, South Africa

16. The Biodesign Center for Fundamental and Applied Microbiomics, School of Life Sciences, Center for Evolution and Medicine, Arizona State University, Tempe, AZ 85287-4701, USA

17. Departamento de Fitopatologia/BIOAGRO, Universidade Federal de Viçosa, Viçosa, MG 36570-900, Brazil

18. APC Microbiome Ireland, University College Cork, Cork, T12 YT20, Ireland

Abstract

The International Committee on Taxonomy of Viruses recently adopted, and is gradually implementing, a binomial naming format for virus species. Although full Latinization of these names remains optional, a standardized nomenclature based on Latinized binomials has the advantage of comparability with all other biological taxonomies. As a language without living native speakers, Latin is more culturally neutral than many contemporary languages, and words built from Latin roots are already widely used in the language of science across the world. Conversion of established species names to Latinized binomials or creation of Latinized binomials de novo may seem daunting, but the rules for name creation are straightforward and can be implemented in a formulaic manner. Here, we describe approaches, strategies and steps for creating Latinized binomials for virus species without prior knowledge of Latin. We also discuss a novel approach to the automated generation of large batches of novel genus and species names. Importantly, conversion to a binomial format does not affect virus names, many of which are created from local languages.

Funder

Nemzeti Kutatási Fejlesztési és Innovációs Hivatal

Science Foundation Ireland

Mississippi Agricultural and Forestry Experiment Station, Mississippi State University

Biotechnology and Biological Sciences Research Council

National Institute of Allergy and Infectious Diseases

H2020 European Research Council

U.S. Department of Agriculture

Publisher

Microbiology Society

Subject

Virology

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