Update: proposed reference sequences for subtypes of hepatitis E virus (species Orthohepevirus A)-Reference-Cited by-同舟云学术

Update: proposed reference sequences for subtypes of hepatitis E virus (species Orthohepevirus A)

Published:2020-07-01 Issue:7 Volume:101 Page:692-698
ISSN:0022-1317
Container-title:Journal of General Virology
language:en
Short-container-title:

Author:

Smith Donald B.¹^ORCID,Izopet Jacques²,Nicot Florence²^ORCID,Simmonds Peter¹^ORCID,Jameel Shahid³^ORCID,Meng Xiang-Jin⁴^ORCID,Norder Heléne⁵^ORCID,Okamoto Hiroaki⁶^ORCID,van der Poel Wim H.M.⁷,Reuter Gábor⁸,Purdy Michael A.⁹

Affiliation:

1. Nuffield Department of Medicine, University of Oxford, Oxford, UK

2. INSERM, UMR1043, Toulouse F-31300, France

3. The Wellcome Trust/DBT India Alliance, Hyderabad, India

4. College of Veterinary Medicine, Virginia Polytechnic Institute and State University, Blacksburg, Virginia, USA

5. Department of Infectious Diseases, Institute of Biomedicine, Sahlgrenska Academy, University of Gothenburg, 41345 Gothenburg, Sweden

6. Division of Virology, Department of Infection and Immunity, Jichi Medical University School of Medicine, Tochigi-ken, Japan

7. Wageningen Bioveterinary Research, Wageningen University and Research, Lelystad, The Netherlands

8. Department of Medical Microbiology and Immunology, Medical School, University of Pécs, Pécs, Hungary

9. Centers for Disease Control and Prevention, National Center for HIV/Hepatitis/STD/TB Prevention, Division of Viral Hepatitis, Atlanta, Georgia, USA

Abstract

In this recommendation, we update our 2016 table of reference sequences of subtypes of hepatitis E virus (HEV; species Orthohepevirus A, family Hepeviridae) for which complete genome sequences are available (Smith et al., 2016). This takes into account subsequent publications describing novel viruses and additional proposals for subtype names; there are now eight genotypes and 36 subtypes. Although it remains difficult to define strict criteria for distinguishing between virus subtypes, and is not within the remit of the International Committee on Taxonomy of Viruses (ICTV), the use of agreed reference sequences will bring clarity and stability to researchers, epidemiologists and clinicians working with HEV.

Funder

Wellcome Trust

Santé Publique France

Publisher

Microbiology Society

Subject

Virology

Reference27 articles.

1. Phylogenetic analysis of global hepatitis E virus sequences: genetic diversity, subtypes and zoonosis

2. Proposed reference sequences for hepatitis E virus subtypes

3. Genetic Variability and Evolution of Hepatitis E Virus

4. Does HEV‐3 subtype play a role in the severity of acute hepatitis E?

5. Genotype specific pathogenicity of hepatitis E virus at the human maternal-fetal interface

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