Occultifur tropicalis f.a., sp. nov., a novel cystobasidiomycetous yeast species isolated from tropical regions

Author:

Khunnamwong Pannida1,Surussawadee Janjira1,Jindamorakot Sasitorn2,Ribeiro José R. A.3,Hagler Allen N.3,Limtong Savitree41

Affiliation:

1. Department of Microbiology, Faculty of Science, Kasetsart University, Bangkok, Thailand

2. Bioresources Technology Unit, National Center for Genetic Engineering and Biotechnology (BIOTEC), Pathumthani, Thailand

3. Departamento de Microbiologia Geral, Instituto de Microbiologia Prof. Paulo de Goes, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Brazil

4. Center for Advanced Studied in Tropical Natural Resources, National Research University Kasetsart University, Thailand

Abstract

Five strains representing a single novel anamorphic yeast species were isolated from sugar cane. Two strains were from tissue (DMKU-SE38, DMKU-SE59T) and two from the external surface (DMKU-SP385, DMKU-SP403) of leaves collected in Thailand and the fifth (IMUFRJ 52020) from the rhizoplane of sugar cane in an organically cultivated field in Brazil. On the basis of sequence analysis of the D1/D2 region of the large subunit (LSU) rRNA gene and the internal transcribed spacer (ITS) region, they were classified as representing a single species of the genus Occultifur. The sequences of the D1/D2 region of the LSU rRNA genes and the ITS regions of the five strains were either identical or differed from each other by only one nucleotide substitution. The novel species was related most closely to Occultifur brasiliensis f.a. CBS 12687T but with 0.7–1.0 % nucleotide substitutions (4–6 nt) in the D1/D2 region of the LSU rRNA gene and 2.5–2.7 % nucleotide substitutions (14–15 nt) in the ITS region. The name Occultifur tropicalis f.a., sp. nov. is proposed. The type strain is DMKU-SE59T ( = BCC 61184T = NBRC 109696T = CBS 13389 T).

Funder

Programa de Apoio a Núcleos de Excelência/Ministério da Ciência, Tecnologia e Inovação

Conselho Nacional de Desenvolvimento Cientifico e Tecnológico

Higher Education Research Promotion and National Research University Project of Thailand

Royal Golden Jubilee PhD program

Thailand Research Fund

Publisher

Microbiology Society

Subject

General Medicine,Ecology, Evolution, Behavior and Systematics,Microbiology

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