Arthrobacter bussei sp. nov., a pink-coloured organism isolated from cheese made of cow’s milk

Author:

Flegler Alexander1ORCID,Runzheimer Katharina1,Kombeitz Vanessa1,Mänz Anna Tatjana1,Heidler von Heilborn David1,Etzbach Lara2ORCID,Schieber Andreas2ORCID,Hölzl Georg3,Hüttel Bruno4ORCID,Woehle Christian4,Lipski André1

Affiliation:

1. University of Bonn, Institute of Nutritional and Food Science, Food Microbiology and Hygiene, Endenicher Allee 19B, 53115 Bonn, Germany

2. University of Bonn, Institute of Nutritional and Food Science, Molecular Food Technology, Endenicher Allee 19B, 53115 Bonn, Germany

3. University of Bonn, Institute of Molecular Physiology and Biotechnology of Plants (IMBIO), 53115 Bonn, Germany

4. Max Planck Institute for Plant Breeding Research, Max Planck-Genome-Centre Cologne (MP-GC), Carl-von-Linné-Weg 10, 50829 Cologne, Germany

Abstract

A pink-coloured bacterium (strain KR32T) was isolated from cheese and assigned to the ‘ Arthrobacter agilis group’. Members of the ‘pink Arthrobacter agilis group’ form a stable clade (100 % bootstrap value) and contain the species Arthrobacter agilis , Arthrobacter ruber and Arthrobacter echini , which share ≥99.0 % 16S rRNA gene sequence similarity. Isolate KR32T showed highest 16S rRNA gene sequence similarity (99.9 %) to A. agilis DSM 20550T. Additional multilocus sequence comparison confirmed the assignment of strain KR32T to the clade ‘pink A. agilis group’. Average nucleotide identity and digital DNA–DNA hybridization values between isolate KR32T and A. agilis DSM 20550T were 82.85 and 26.30 %, respectively. The G+C content of the genomic DNA of isolate KR32T was 69.14 mol%. Chemotaxonomic analysis determined anteiso-C15 : 0 as the predominant fatty acid and MK-9(H2) as the predominant menaquinone. Polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylinositol and monoacyldimannosyl-monoacylglycerol. The peptidoglycan type of the isolate was A3α. The carotenoid bacterioruberin was detected as the major pigment. At 10 °C, strain KR32T grew with increased concentrations of bacterioruberin and production of unsaturated fatty acids. Strain KR32T was a Gram-stain-positive, catalase-positive, oxidase-positive and coccus-shaped bacterium with optimal growth at 27–30 °C and pH 8. The results of phylogenetic and phenotypic analyses enabled the differentiation of the isolate from other closely related species of the ‘pink A. agilis group’. Therefore, strain KR32T represents a novel species for which the name Arthrobacter bussei sp. nov. is proposed. The type strain is KR32T (=DSM 109896T=LMG 31480T=NCCB 100733T).

Publisher

Microbiology Society

Subject

General Medicine,Ecology, Evolution, Behavior and Systematics,Microbiology

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