Lacticaseibacillus parakribbianus sp. nov., isolated from a pig farm faeces dump

Author:

Bai Lu1,Paek Jayoung1,Shin Yeseul1,Kim Hongik2,Kim Si Hyun3,Shin Jeong Hwan4,Kook Joong-Ki5,Chang Young Hyo1

Affiliation:

1. ABS Research Support Center, KRIBB, 125 Gwahak-ro, Yuseong-gu, Daejeon 34141, Republic of Korea

2. Vitabio, Inc., Daejeon, 305-500, Republic of Korea

3. Department of Clinical Laboratory Science, Semyung University, Jecheon, Republic of Korea

4. Department of Laboratory Medicine, Inje University College of Medicine, Busan 614-735, Republic of Korea

5. Korean Collection for Oral Microbiology and Department of Oral Biochemistry, School of Dentistry, Chosun University, Gwangju, 501-759, Republic of Korea

Abstract

A lactic acid bacterium isolated from pig faeces was characterized using a polyphasic approach. The strain was Gram-stain-positive, rod-shaped, and facultative anaerobic. Phylogenetic analysis of the 16S rRNA gene sequence indicated that the isolate belonged to the genus Lacticaseibacillus . The multi-locus sequence tree revealed that the strain formed a sub-cluster adjacent to Lacticaseibacillus kribbianus. The main fatty acids were C16 : 0 and C18 : 1ω9c. The average nucleotide identity value, average amino acid identity, and genome-to-genome distance for YH-lacS6T and its most closely related strain, L. kribbianus, were 85.4, 85.2 and 29.2 %, respectively. The G+C content of the genomic DNA was 61.6 mol%. The major polar lipids were diphosphatidylglycerol, phosphatidylglycerol, aminophospholipids and phospholipids. The cell-wall peptidoglycan did not contain meso-diaminopimelic acid. Thus, YH-lacS6T (=KCTC 21186T=JCM 34954T) represents a novel species. The name Lacticaseibacillus parakribbianus sp. nov. is proposed.

Funder

National Research Foundation of Korea

Korea Research Institute of Bioscience and Biotechnology

Publisher

Microbiology Society

Subject

General Medicine,Ecology, Evolution, Behavior and Systematics,Microbiology

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