Cupriavidus agavae sp. nov., a species isolated from Agave L. rhizosphere in northeast Mexico-Reference-Cited by-同舟云学术

Cupriavidus agavae sp. nov., a species isolated from Agave L. rhizosphere in northeast Mexico

Published:2020-07-01 Issue:7 Volume:70 Page:4165-4170
ISSN:1466-5026
Container-title:International Journal of Systematic and Evolutionary Microbiology
language:en
Short-container-title:

Author:

Arroyo-Herrera Ivan¹,Maldonado-Hernández Jessica²¹^ORCID,Rojas-Rojas Fernando-Uriel³¹^ORCID,Meza-Radilla Georgina¹,Larios-Serrato Violeta¹^ORCID,Vásquez-Murrieta María-Soledad¹^ORCID,Whitman William B.⁴,Estrada-de los Santos Paulina¹^ORCID

Affiliation:

1. Instituto Politécnico Nacional, Escuela Nacional de Ciencias Biológicas. Prol. Carpio y Plan de Ayala s/n, Col. Santo Tomás, Alcaldía Miguel Hidalgo, C.P. 11340, Mexico City, Mexico

2. Universidad del Valle de México, Chapultepec. Av. Observatorio 400, Col. 16 de septiembre, Alcaldía Miguel Hidalgo, C.P. 11810. Mexico City, Mexico

3. Laboratorio de Ciencias AgroGenómicas, Escuela Nacional de Estudios Superiores, Universidad Nacional Autónoma de México, León, Guanajuato, Mexico

4. Department of Microbiology, University of Georgia, Athens, GA, 30602, USA

Abstract

During the isolation of bacteria from the Agave L. rhizosphere in northeast Mexico, four strains with similar BOX-PCR patterns were collected. The 16S rRNA gene sequences of all four strains were very similar to each other and that of the type strains of

Cupriavidus metallidurans

CH34T (98.49 % sequence similarity) and

Cupriavidus necator

N-1T (98.35 %). The genome of strain ASC-9842T was sequenced and compared to those of other

Cupriavidus

species. ANIb and ANIm values with the most closely related species were lower than 95%, while the in silico DNA–DNA hybridization values were also much lower than 70 %, consistent with the proposal that they represent a novel species. This conclusion was supported by additional phenotypic and chemotaxonomic analyses. Therefore, the name Cupriavidus agavae sp. nov. is proposed with the type strain ASC-9842T (=LMG 26414T=CIP 110327T).

Funder

Secretaría de Investigación y Posgrado, Instituto Politécnico Nacional

Office of Science

Publisher

Microbiology Society

Subject

General Medicine,Ecology, Evolution, Behavior and Systematics,Microbiology

Reference28 articles.

1. Plasmids pMOL28 and pMOL30 of Cupriavidus metallidurans Are Specialized in the Maximal Viable Response to Heavy Metals

2. Comparative genomic analyses of nickel, cobalt and vitamin B12 utilization

3. Ralstonia taiwanensis sp. nov., isolated from root nodules of Mimosa species and sputum of a cystic fibrosis patient.

4. Legume Symbiotic Nitrogen Fixation byβ-Proteobacteria Is Widespread inNature

5. Ralstonia respiraculi sp. nov., isolated from the respiratory tract of cystic fibrosis patients

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