Genome-based reclassification of Picrophilus torridus Zillig et al. 1996 as a later heterotypic synonym of Picrophilus oshimae Schleper et al. 1996

Author:

Habib Neeli1,Narsing Rao Manik Prabhu23,Jan Sohail Ahmad4,Banerjee Aparna5,Thamchaipenet Arinthip23,Li Wen-Jun67ORCID

Affiliation:

1. Department of Microbiology, Shaheed Benazir Bhutto Women University Peshawar, Khyber Pakhtunkhwa (KPK), Pakistan

2. Omics Center for Agriculture, Bioresources, Food and Health, Kasetsart University (OmiKU), Bangkok 10900, Thailand

3. Department of Genetics, Faculty of Science, Kasetsart University, Chatuchak, Bangkok 10900, Thailand

4. Department of Bioinformatics and Biosciences, Capital University of Science and Technology, Islamabad, Pakistan

5. Centro de Investigación de Estudios Avanzados del Maule (CIEAM), Vicerrectoría de Investigación y Postgrado, Universidad Católica del Maule, 3466706 Talca, Chile

6. State Key Laboratory of Desert and Oasis Ecology, Xinjiang Institute of Ecology and Geography, Chinese Academy of Sciences, Urumqi 830011, PR China

7. State Key Laboratory of Biocontrol, Guangdong Provincial Key Laboratory of Plant Resources and Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), School of Life Sciences, Sun Yat-Sen University, Guangzhou 510275, PR China

Abstract

In the present study, we attempt to clarify the taxonomic positions of Picrophilus oshimae and Picrophilus torridus . The 16S rRNA gene sequence similarity between P. oshimae DSM 9789T and P. torridus DSM9790T (99.4 %) was above the threshold value (98.6 %) for bacterial species delineation. The average nucleotide identity (ANI) and digital DNA–DNA hybridization (dDDH) values between P. oshimae DSM 9789T and P. torridus DSM9790T were higher than the threshold values (95–96 % for ANI and 70 % for dDDH) for bacterial species delineation. The present results indicate that Picrophilus torridus Zillig et al. 1996 is a later heterotypic synonym of Picrophilus oshimae Schleper et al. 1996.

Funder

Post-doctorate fellowship under Kasetsart University Reinventing University Program

National Natural Science Foundation of China

Publisher

Microbiology Society

Subject

General Medicine,Ecology, Evolution, Behavior and Systematics,Microbiology

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