Streptomyces apricus sp. nov., isolated from soil

Author:

Hariharan Janani1ORCID,Choudoir Mallory J.2ORCID,Diebold Peter3ORCID,Panke-Buisse Kevin4ORCID,Buckley Daniel H.13ORCID

Affiliation:

1. School of Integrative Plant Science, Cornell University, Ithaca, NY, USA

2. Department of Microbiology, University of Massachusetts, Amherst, MA, USA

3. Department of Microbiology, Cornell University, Ithaca, NY, USA

4. United States Department of Agriculture, Agricultural Research Service, Madison, WI, USA

Abstract

A novel Streptomyces strain, SUN51T, was isolated from soils sampled in Wisconsin, USA, as part of a Streptomyces biogeography survey. Genome sequencing revealed that this strain had less than 90 % average nucleotide identity (ANI) to type species of Streptomyces : SUN51T was most closely related to Streptomyces dioscori A217T (99.5 % 16S rRNA gene identity, 89.4 % ANI). Genome size was estimated at 8.81 Mb, and the genome DNA G+C content was 72 mol%. The strain possessed the cellular fatty acids anteiso-C15 : 0, iso-C16 : 0, 16 : 1 ω7c, anteiso-C17 : 0, iso-C14 : 0 and C16 : 0. The predominant menaquinones were MK-9 H4, MK-9 H6 and MK-9 H8. Strain SUN51T contained the polar lipids phosphatidic acid, phosphatidyl ethanolamine, phosphatidyl glycerol and diphosphatidyl glycerol. The cell wall contained ll-diaminopimelic acid. The strain could grow on a broad range of carbon sources and tolerate temperatures of up to 40 °C. The results of the polyphasic study confirmed that this isolate represents a novel species of the genus Streptomyces , for which the name Streptomyces apricus sp. nov. is proposed. The type strain of this species is SUN51T (=NRRL B-65543T=JCM 33736T).

Funder

Directorate for Biological Sciences

Publisher

Microbiology Society

Subject

General Medicine,Ecology, Evolution, Behavior and Systematics,Microbiology

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