Sphingobacterium hungaricum sp. nov. a novel species on the borderline of the genus Sphingobacterium

Author:

Tóth Ákos1ORCID,Máté Rózsa2,Kutasi József2,Tóth Erika3,Bóka Károly4,Táncsics András5,Nagy István67ORCID,Kovács Gábor87,Kosztik Judit1,Bata-Vidács Ildikó1ORCID,Kukolya József1ORCID

Affiliation:

1. Research Group for Food Biotechnology, Institute of Food Science and Technology, Hungarian University of Agriculture and Life Sciences, Budapest, Hungary

2. BioFil Microbiological, Biotechnological and Biochemical Ltd., Budapest, Hungary

3. Department of Microbiology, Eötvös Loránd University, Budapest, Hungary

4. Department of Plant Anatomy, Eötvös Loránd University, Budapest, Hungary

5. Department of Molecular Ecology, Institute of Aquaculture and Environmental Safety, Hungarian University of Agriculture and Life Sciences, Gödöllő, Hungary

6. Institute of Biochemistry, Biological Research Centre, Eötvös Loránd Research Network, Szeged, Hungary

7. SeqOmics Biotechnology Ltd., Mórahalom, Hungary

8. University of Sopron, Sopron, Hungary

Abstract

A Gram-reaction-negative bacterial strain, designated Kb22T, was isolated from agricultural soil and characterized using a polyphasic approach to determine its taxonomic position. On the basis of 16S rRNA gene sequence analysis, the strain shows highest similarity (94.39 %) to Sphingobacterium nematocida M-SX103T. The highest average nucleotide identity value (71.83 %) was found with Sphingobacterium composti T5-12T, and the highest amino acid identity value (66.65 %) was found with Sphingobacterium olei HAL-9T. Cells are aerobic, non-motile rods. The isolate was found to be positive for catalase and oxidase tests. The assembled genome of strain Kb22T has a total length of 4,06 Mb, the DNA G+C content is 38.1 mol%. The only isoprenoid quinone is menaquinone 7 (MK-7). The major fatty acids are iso-C15:0 (28.4%), summed feature 3 (C16:1 ω7c and/or iso-C15:0 2-OH) (25.7 %) and iso-C17:0 3-OH (19.7 %). Based on phenotypic characteristics and phylogenetic results, it is concluded that strain Kb22T is a member of the genus Sphingobacterium and represents a novel species for which the name Sphingobacterium hungaricum sp. nov. is proposed. The type strain of the species is strain Kb22T (=LMG 31574T=NCAIM B.02638T).

Funder

Magyar Tudományos Akadémia

Nemzeti Kutatási, Fejlesztési és Innovaciós Alap

Publisher

Microbiology Society

Subject

General Medicine,Ecology, Evolution, Behavior and Systematics,Microbiology

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