Ovalopodium rosalinum sp. nov., Planopodium haveli gen. nov, sp. nov., Planopodium desertum comb. nov. and new insights into phylogeny of the deeply branching members of the order Himatismenida (Amoebozoa)

Author:

Kudryavtsev Alexander12ORCID,Völcker Eckhard3ORCID,Clauß Steffen3,Pawlowski Jan456

Affiliation:

1. Department of Invertebrate Zoology, Faculty of Biology, Saint-Petersburg State University, Universitetskaya nab., 7/9 199034 Saint-Petersburg, Russia

2. Laboratory of Cellular and Molecular Protistology, Zoological Institute RAS, Universitetskaya nab., 1 199034 Saint-Petersburg, Russia

3. Penard Labs, Cape Town, South Africa

4. Institute of Oceanology, Polish Academy of Sciences, 81-712 Sopot, Poland

5. ID-Gene ecodiagnostics, Campus Biotech Innovation Park, 1202, Geneva, Switzerland

6. Department of Genetics and Evolution, University of Geneva, Sciences III, 1211 Geneva, Switzerland

Abstract

The order Himatismenida (Amoebozoa, Discosea) comprises naked amoebae with an organic coat that is located on the dorsal surface of the cell. The phylogenetic relationships among deeply branching genera of the Himatismenida are unclear, as data on the species diversity of the himatismenid genera is largely restricted to the derived genus Cochliopodium. Here, we describe two new amoeba species that branch at the base of the order Himatismenida, evidenced by SSU rRNA gene and multigene analyses. Among them, a freshwater species Planopodium haveli gen. nov., sp. nov. has a dorsal cell coat consisting of flat, oval scales. This species forms a clade at the base of the Himatismenida, and the previously described Ovalopodium desertum, its closest relative, is transferred into the new genus as Planopodium desertum comb. nov. Although the two species are barely distinguishable by their sequence data, they are clearly distinct in morphology. Using this data, we can report the first evidence of a dorsal cell coat consisting of scales outside of the genus Cochliopodium. The other species has a marine origin and branches deeply, close to the root of the phylogenetic tree of Himatismenida. Based on the morphology of this amoeba, it should be described as Ovalopodium rosalinum sp. nov., a new species of the genus Ovalopodium. Analyses of the phylogenetic relationships and the ultrastructure of the deeply branching himatismenids, together with several of the newly obtained gene sequences of Parvamoeba and Cochliopodium, suggest that some elements of the dorsal cell coat of Ovalopodium may be ancestral for Himatismenida and have been partly retained in various more derived species of this clade, in particular, Cochliopodium gallicum. Although actin and Cox1 gene data do not resolve the higher-level relationships in Himatismenida, they correspond to the grouping of species within most genera.

Funder

Russian Science Support Foundation

Российский Фонд Фундаментальных Исследований

Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung

Publisher

Microbiology Society

Subject

General Medicine,Ecology, Evolution, Behavior and Systematics,Microbiology

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