Predictive characterisation identifies global sources of acyanogenic germplasm of a key forage species

Abstract

Forage breeding is essential for animal production, and its effectiveness depends on available genetic diversity. However, breeding is challenged when there is limited evaluation of genebank accessions. Predictive characterisation based on ecogeographic information is a promising approach to address the urgent need to expedite evaluation of target traits in existing collections of forage genetic resources. Using white clover (Trifolium repens L.) as an example, we applied predictive characterisation to model the expression of cyanogenesis, an important process related to the generation of anti-quality compounds. Data on genebank accessions and other population occurrences were divided into two subsets, one including accessions that had been evaluated for this trait, and the other with those that had not. The occurrence sites of the records with the best geo-referencing quality were characterised ecogeographically. The cyanogenesis trait was predicted using the calibration method, in which some selected ecogeographic variables were used as independent variables. Thus, we identified 470 populations with high probability of being acyanogenic. A small sample of populations (18 accessions) was evaluated to ratify the usefulness of this approach. Seventeen of the evaluated accessions showed a complete acyanogenic response and one showed 95% acyanogenic plants. Our study also expanded the areas previously rated as highly acyanogenic. In conclusion, our results contribute in a predictive way and with minimum cost to increase the knowledge of wild populations and genebank accessions in relation to a target trait. This facilitation in the generation of evaluation data may encourage greater investment in forage plant breeding and boost germplasm utilisation.