Maximizing Analytical Performance in Biomolecular Discovery with LC-MS: Focus on Psychiatric Disorders

Author:

Smith Bradley J.1,Guest Paul C.123,Martins-de-Souza Daniel45671

Affiliation:

1. 1Laboratory of Neuroproteomics, Department of Biochemistry and Tissue Biology, Institute of Biology, University of Campinas, São Paulo, Brazil; email: dmsouza@unicamp.br

2. 2Department of Psychiatry, Otto-von-Guericke-University Magdeburg, Magdeburg, Germany

3. 3Laboratory of Translational Psychiatry, Otto-von-Guericke-University Magdeburg, Magdeburg, Germany

4. 4Experimental Medicine Research Cluster, University of Campinas, São Paulo, Brazil

5. 5National Institute of Biomarkers in Neuropsychiatry, National Council for Scientific and Technological Development, São Paulo, Brazil

6. 7INCT in Modelling Human Complex Diseases with 3D Platforms (Model3D), São Paulo, Brazil

7. 6D'Or Institute for Research and Education, São Paulo, Brazil

Abstract

In this review, we discuss the cutting-edge developments in mass spectrometry proteomics and metabolomics that have brought improvements for the identification of new disease-based biomarkers. A special focus is placed on psychiatric disorders, for example, schizophrenia, because they are considered to be not a single disease entity but rather a spectrum of disorders with many overlapping symptoms. This review includes descriptions of various types of commonly used mass spectrometry platforms for biomarker research, as well as complementary techniques to maximize data coverage, reduce sample heterogeneity, and work around potentially confounding factors. Finally, we summarize the different statistical methods that can be used for improving data quality to aid in reliability and interpretation of proteomics findings, as well as to enhance their translatability into clinical use and generalizability to new data sets.

Publisher

Annual Reviews

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