Neural network modeling of the dependence of RAGE inhibitory activity of chemical compounds on the energy spectrum of multiple docing

Author:

Vasiliev Pavel M.,Perfiliev Maxim A.,Kochetkov Andrey N.

Abstract

Simple and multiple docking into the RAGE receptor of its known inhibitors have been carried out. For these compounds, the energies of simple docking into the specific binding site and the energy spectra of multiple docking throughout the entire volume of the RAGE receptor were calculated. A model of the dependence of the level of RAGE inhibitory activity of chemical compounds on the energy of their simple docking into the specific binding site has been constructed. A neural network model of the dependence of the level of RAGE inhibitory activity on the energy spectrum of multiple docking of chemical compounds has been formed. It is shown that the accuracy of the neural network model based on multiple docking significantly exceeds the accuracy of the model based on simple docking. The found model is used in the directed search for new compounds with RAGE inhibitory activity, which will become the basis for the creation of innovative drugs for the treatment of complications in diabetes mellitus.

Publisher

Volgograd State Medical University

Subject

Anesthesiology and Pain Medicine

Reference16 articles.

1. Ansari N.A., Rasheed Z. Non-enzymatic glycation of proteins: from diabetes to cancer. Biochemistry (Moscow) Supplement Series B: Biomedical Chemistry (Int. Ed.). 2009;3(4):335–345.

2. Yan S.F., Ramasamy R., Schmidt A.M. Mechanisms of disease: advanced glycation end-products and their receptor in inflammation and diabetes complications. Nature Clinical Practice Endocrinology & Metabolism. 2008;4(5):285–293.

3. World Health Organization: Diabetes, 2019. URL: https://www.who.int/news-room/fact-sheets/detail/diabetes.

4. Vassiliev P.M., Kochetkov A.N., Spasov A.A., Perfilev M.A. The energy spectrum of multiple docking as a multidimensional metric of the affinity of chemical compounds to pharmacologically relevant biotargets. Volgogradskii nauchno-meditsinskii zhurnal = Volgograd scientific and medical journal. 2021;3:57–61 (In Russ.).

5. Kolmogorov A.N. On the representation of conti-nuous functions of several variables as a superposition of continuous functions of one variable. Doklady AN SSSR = Reports of the Academy of Sciences of the USSR. 1957; 114(5):953–956. (In Russ.).

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号  京ICP备18003416号-3