Molecular dynamics simulations and linear response theories jointly describe biphasic responses of myoglobin relaxation and reveal evolutionarily conserved frequent communicators-Reference-Cited by-同舟云学术

Molecular dynamics simulations and linear response theories jointly describe biphasic responses of myoglobin relaxation and reveal evolutionarily conserved frequent communicators

Published:2019 Issue:0 Volume:16 Page:473-484
ISSN:2189-4779
Container-title:Biophysics and Physicobiology
language:en
Short-container-title:BIOPHYSICS

Author:

Huang Bang-Chieh¹,Yang Lee-Wei¹²³⁴

Affiliation:

1. Institute of Bioinformatics and Structural Biology, National Tsing-Hua University

2. Bioinformatics Program, Taiwan International Graduate Program, Institute of Information Sciences, Academia Sinica

3. Department of Life Science, National Tsing Hua University

4. Physics Division, National Center for Theoretical Sciences

Publisher

Biophysical Society of Japan

Subject

General Medicine

Link

https://www.jstage.jst.go.jp/article/biophysico/16/0/16_473/_pdf

Reference19 articles.

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2. [3] Fujii, N., Mizuno, M., Ishikawa, H. & Mizutani, Y. Observing Vibrational Energy Flow in a Protein with the Spatial Resolution of a Single Amino Acid Residue. J. Phys. Chem. Lett. 5, 3269–3273 (2014).

3. [5] Mizutani, Y. & Kitagawa, T. Direct Observation of Cooling of Heme Upon Photodissociation of Carbonmonoxy Myoglobin. Science 278, 443–446 (1997).

4. [10] Kondoh, M., Mizuno, M. & Mizutani, Y. Importance of Atomic Contacts in Vibrational Energy Flow in Proteins. J. Phys. Chem. Lett. 7, 1950–1954 (2016).

5. [13] Ghosh, A. & Vishveshwara, S. A study of communication pathways in methionyl- tRNA synthetase by molecular dynamics simulations and structure network analysis. Proc. Natl. Acad. Sci. USA 104, 15711–15716 (2007).

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