Short communication: Imputation performances of 3 low-density marker panels in beef and dairy cattle-Reference-Cited by-同舟云学术

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Short communication: Imputation performances of 3 low-density marker panels in beef and dairy cattle

Published:2012-07 Issue:7 Volume:95 Page:4136-4140
ISSN:0022-0302
Container-title:Journal of Dairy Science
language:en
Short-container-title:Journal of Dairy Science

Author:

Dassonneville R.,Fritz S.,Ducrocq V.,Boichard D.

Funder

Agence Nationale de la Recherche

APISGENE

Publisher

American Dairy Science Association

Subject

Genetics,Animal Science and Zoology,Food Science

Reference18 articles.

1. Imputation of genotypes from low- to high-density genotyping platforms and implications for genomic selection;Berry;Animal,2011

2. Design of a bovine low-density SNP array optimized for imputation;Boichard;PLoS One,2012

3. Rapid and accurate haplotype phasing and missing-data inference for whole-genome association studies by use of localized haplotype clustering;Browning;Am. J. Hum. Genet.,2007

4. Effect of imputing markers from a low-density chip on the reliability of genomic breeding values in Holstein populations;Dassonneville;J. Dairy Sci.,2011

5. A hidden Markov model combining linkage and linkage disequilibrium information for haplotype reconstruction and quantitative trait locus fine mapping;Druet;Genetics,2010

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1. GENETIC DIFFERENTIATION AMONG RED COLORED BOS INDICUS SUBCONTINENT ORIGIN BREEDS USING SNP CHIP DATA;The Journal of Animal and Plant Sciences;2024-03-22

2. Restriction site-associated DNA sequencing technologies as an alternative to low-density SNP chips for genomic selection: a simulation study in layer chickens;BMC Genomics;2023-05-19

3. Effect of minor allele frequency and density of single nucleotide polymorphism marker arrays on imputation performance and prediction ability using the single-step genomic Best Linear Unbiased Prediction in a simulated beef cattle population;Animal Production Science;2023-04-04

4. LmTag: functional-enrichment and imputation-aware tag SNP selection for population-specific genotyping arrays;Briefings in Bioinformatics;2022-07-02

5. LmTag: functional-enrichment and imputation-aware tag SNP selection for population-specific genotyping arrays;2022-01-28

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