Delivering a toxic metal to the active site of urease

Author:

Nim Yap Shing1ORCID,Fong Ivan Yu Hang2,Deme Justin23ORCID,Tsang Ka Lung1,Caesar Joseph23,Johnson Steven23,Pang Longson Tsz Hin1ORCID,Yuen Nicholas Man Hon1ORCID,Ng Tin Long Chris1ORCID,Choi Tung1ORCID,Wong Yakie Yat Hei1ORCID,Lea Susan M.23ORCID,Wong Kam-Bo1ORCID

Affiliation:

1. School of Life Sciences, Centre for Protein Science and Crystallography, State Key Laboratory of Agrobiotechnology, The Chinese University of Hong Kong, Hong Kong, China.

2. Sir William Dunn School of Pathology, University of Oxford, South Parks Road, Oxford OX1 3RE, UK.

3. Center for Structural Biology, CCR, NCI, Boyles Street, Frederick, MD 21702, USA.

Abstract

Urease is a nickel (Ni) enzyme that is essential for the colonization of Helicobacter pylori in the human stomach. To solve the problem of delivering the toxic Ni ion to the active site without diffusing into the cytoplasm, cells have evolved metal carrier proteins, or metallochaperones, to deliver the toxic ions to specific protein complexes. Ni delivery requires urease to form an activation complex with the urease accessory proteins UreFD and UreG. Here, we determined the cryo–electron microscopy structures of H. pylori UreFD/urease and Klebsiella pneumoniae UreD/urease complexes at 2.3- and 2.7-angstrom resolutions, respectively. Combining structural, mutagenesis, and biochemical studies, we show that the formation of the activation complex opens a 100-angstrom-long tunnel, where the Ni ion is delivered through UreFD to the active site of urease.

Publisher

American Association for the Advancement of Science (AAAS)

Subject

Multidisciplinary

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