Improved de novo genomic assembly for the domestic donkey

Author:

Renaud Gabriel1ORCID,Petersen Bent23ORCID,Seguin-Orlando Andaine145ORCID,Bertelsen Mads Frost6ORCID,Waller Andrew7ORCID,Newton Richard7,Paillot Romain7,Bryant Neil7,Vaudin Mark7,Librado Pablo15ORCID,Orlando Ludovic15ORCID

Affiliation:

1. Centre for GeoGenetics, Natural History Museum of Denmark, Øster Voldgade 5-7, 1350K Copenhagen, Denmark.

2. DTU Bioinformatics, Department of Bio and Health Informatics, Technical University of Denmark, Kongens Lyngby, Denmark.

3. Centre of Excellence for Omics-Driven Computational Biodiscovery, Faculty of Applied Sciences, Asian Institute of Medicine, Science and Technology, Kedah, Malaysia.

4. National High-Throughput DNA Sequencing Center, Copenhagen, Denmark.

5. Laboratoire d’Anthropobiologie Moléculaire et d’Imagerie de Synthése UMR 5288, Université de Toulouse, CNRS, Université Paul Sabatier, 31000 Toulouse, France.

6. Center for Zoo and Wild Animal Health, Copenhagen Zoo, 2000 Frederiksberg, Denmark.

7. Animal Health Trust, Lanwades Park, Kentford, Newmarket, Suffolk CB8 7UU, UK.

Abstract

New donkey genome reference unveils chromosomal rearrangements potentially involved in equine speciation and hybrid sterility.

Funder

European Research Council

Danish National Research Foundation

Danish Council for Independent Research, Natural Sciences

Villum Fonden miGENEPI research project

Initiative d’Excellence Chaires d’attractivité, Université de Toulouse

Marie-Curie Intra-European fellowship

Publisher

American Association for the Advancement of Science (AAAS)

Subject

Multidisciplinary

Reference62 articles.

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2. Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse

3. Prehistoric genomes reveal the genetic foundation and cost of horse domestication;Schubert M.;Proc. Natl. Acad. Sci. U.S.A.,2014

4. Ancient genomic changes associated with domestication of the horse

5. Ancient DNA from Nubian and Somali wild ass provides insights into donkey ancestry and domestication;Kimura B.;Proc. Biol. Sci,2011

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