The origin of domestication genes in goats

Author:

Zheng Zhuqing1ORCID,Wang Xihong1ORCID,Li Ming1ORCID,Li Yunjia1,Yang Zhirui1,Wang Xiaolong1ORCID,Pan Xiangyu1ORCID,Gong Mian1ORCID,Zhang Yu1,Guo Yingwei1ORCID,Wang Yu1ORCID,Liu Jing1ORCID,Cai Yudong1ORCID,Chen Qiuming1,Okpeku Moses23ORCID,Colli Licia45ORCID,Cai Dawei6ORCID,Wang Kun7ORCID,Huang Shisheng1,Sonstegard Tad S.8ORCID,Esmailizadeh Ali9ORCID,Zhang Wenguang10,Zhang Tingting1,Xu Yangbin1ORCID,Xu Naiyi1,Yang Yi11ORCID,Han Jianlin1213ORCID,Chen Lei7ORCID,Lesur Joséphine14ORCID,Daly Kevin G.15ORCID,Bradley Daniel G.15ORCID,Heller Rasmus16ORCID,Zhang Guojie2171819ORCID,Wang Wen2719ORCID,Chen Yulin1ORCID,Jiang Yu1ORCID

Affiliation:

1. Key Laboratory of Animal Genetics, Breeding and Reproduction of Shaanxi Province, College of Animal Science and Technology, Northwest A&F University, Yangling 712100, China.

2. State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650223, China.

3. Discipline of Genetics, School of Life Science, University of Kwazulu-Natal, Durban 4000, South Africa.

4. Dipartimento di Scienze Animali, della Nutrizione e degli Alimenti, Facoltà di Scienze Agrarie, Alimentari e Ambientali, Università Cattolica del S. Cuore, via Emilia Parmense n. 84, 29122, Piacenza (PC), Italy.

5. BioDNA–Centro di Ricerca sulla Biodiversità e sul DNA Antico, Facoltà di Scienze Agrarie, Alimentari e Ambientali, Università Cattolica del S. Cuore, via Emilia Parmense n. 84, 29122, Piacenza (PC), Italy.

6. Research Center for Chinese Frontier Archaeology, Jilin University, Changchun 130012, China.

7. Center for Ecological and Environmental Sciences, Northwestern Polytechnical University, Xi’an 710072, China.

8. Recombinetics Inc., St. Paul, MN, USA.

9. Department of Animal Science, Faculty of Agriculture, Shahid Bahonar University of Kerman, Kerman, PB 76169-133, Iran.

10. College of Animal Science, Inner Mongolia Agricultural University, Hohhot 010018, China.

11. Institute of Preventive Veterinary Medicine, Zhejiang Provincial Key Laboratory of Preventive Veterinary Medicine, College of Animal Sciences, Zhejiang University, Hangzhou 310058, China.

12. CAAS-ILRI Joint Laboratory on Livestock and Forage Genetic Resources, Institute of Animal Science, Chinese Academy of Agriculture Sciences (CAAS), Beijing 100193, China.

13. International Livestock Research Institute (ILRI), Nairobi 00100, Kenya.

14. UMR 7209 MNHN/CNRS CP 5555, rue Buffon, 75005 Paris, France.

15. Smurfit Institute of Genetics, Trinity College Dublin, Dublin 2, Ireland.

16. Section for Computational and RNA Biology, Department of Biology, University of Copenhagen, Copenhagen N 2200, Denmark.

17. China National GeneBank, BGI-Shenzhen, Shenzhen 518083, China.

18. Section for Ecology and Evolution, Department of Biology, University of Copenhagen, DK-2100 Copenhagen, Denmark.

19. Center for Excellence in Animal Evolution and Genetics, Chinese Academy of Sciences, Kunming 650223, China.

Abstract

Goat domestication selection mainly focused on immune and neural genes and involved both standing and introgressed variation.

Funder

National Natural Science Foundation of China

Strategic Priority Research Program of CAS

Talents Team Construction Fund of Northwestern Polytechnical University

Tang scholar at Northwest A&F University

The Chinese Government contribution to CAAS-ILRI Joint Laboratory on Livestock and Forage Genetic Resources in Beijing

DFF Sapere Aude grant

Publisher

American Association for the Advancement of Science (AAAS)

Subject

Multidisciplinary

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