CMOS electrochemical pH localizer-imager

Author:

Jung Han Sae1ORCID,Jung Woo-Bin1ORCID,Wang Jun1ORCID,Abbott Jeffrey123ORCID,Horgan Adrian4ORCID,Fournier Maxime4ORCID,Hinton Henry1ORCID,Hwang Young-Ha1ORCID,Godron Xavier4ORCID,Nicol Robert5ORCID,Park Hongkun23ORCID,Ham Donhee1ORCID

Affiliation:

1. John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA 02138, USA.

2. Department of Chemistry and Chemical Biology, Harvard University, Cambridge, MA 02138, USA.

3. Department of Physics, Harvard University, Cambridge, MA 02138, USA.

4. DNA Script, Le Kremlin-Bicêtre, 94270, France.

5. Broad Institute of MIT and Harvard, 415 Main Street, Cambridge, MA 02142, USA.

Abstract

pH controls a large repertoire of chemical and biochemical processes in water. Densely arrayed pH microenvironments would parallelize these processes, enabling their high-throughput studies and applications. However, pH localization, let alone its arrayed realization, remains challenging because of fast diffusion of protons in water. Here, we demonstrate arrayed localizations of picoliter-scale aqueous acids, using a 256-electrochemical cell array defined on and operated by a complementary metal oxide semiconductor (CMOS)–integrated circuit. Each cell, comprising a concentric pair of cathode and anode with their current injections controlled with a sub-nanoampere resolution by the CMOS electronics, creates a local pH environment, or a pH “voxel,” via confined electrochemistry. The system also monitors the spatiotemporal pH profile across the array in real time for precision pH control. We highlight the utility of this CMOS pH localizer-imager for high-throughput tasks by parallelizing pH-gated molecular state encoding and pH-regulated enzymatic DNA elongation at any selected set of cells.

Publisher

American Association for the Advancement of Science (AAAS)

Subject

Multidisciplinary

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