1. Department of Molecular Medicine and Haematology, University of the Witwatersrand, Johannesburg, South Africa.
2. Division of Medical Virology, Wellcome Centre for Infectious Diseases in Africa, Institute of Infectious Disease and Molecular Medicine, University of Cape Town, Cape Town, South Africa.
3. National Health Laboratory Service, Cape Town, South Africa.
4. Botswana Harvard AIDS Institute Partnership and Botswana Harvard HIV Reference Laboratory, Gaborone, Botswana.
5. Centre for Epidemic Response and Innovation, Stellenbosch University, Stellenbosch, South Africa.
6. KwaZulu-Natal Research Innovation and Sequencing Platform, University of KwaZulu-Natal, Durban, South Africa.
7. Laboratory of Clinical and Epidemiological Virology, Katholieke Universiteit Leuven, Leuven, Belgium.
8. Department of Zoology, University of Oxford, Oxford, UK.
9. Royal Veterinary College, London, UK.
10. Department of Mathematics, Imperial College London, London, UK.
11. Section of Epidemiology, Department of Public Health, University of Copenhagen, Copenhagen, Denmark.
12. MRC Centre for Global Infectious Disease Analysis, School of Public Health, Imperial College London, London, UK.
13. The Abdul Latif Jameel Institute for Disease and Emergency Analytics, School of Public Health, Imperial College London, London, UK.
14. Department of Computer Science, University of Oxford, Oxford, UK.
15. Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.