Total Synthesis of a Functional Designer Eukaryotic Chromosome

Author:

Annaluru Narayana1,Muller Héloïse1234,Mitchell Leslie A.25,Ramalingam Sivaprakash1,Stracquadanio Giovanni26,Richardson Sarah M.6,Dymond Jessica S.27,Kuang Zheng2,Scheifele Lisa Z.28,Cooper Eric M.2,Cai Yizhi29,Zeller Karen2,Agmon Neta25,Han Jeffrey S.10,Hadjithomas Michalis11,Tullman Jennifer6,Caravelli Katrina212,Cirelli Kimberly112,Guo Zheyuan113,London Viktoriya113,Yeluru Apurva113,Murugan Sindurathy6,Kandavelou Karthikeyan114,Agier Nicolas1516,Fischer Gilles1516,Yang Kun26,Martin J. Andrew26,Bilgel Murat13,Bohutskyi Pavlo13,Boulier Kristin M.12,Capaldo Brian J.13,Chang Joy13,Charoen Kristie13,Choi Woo Jin13,Deng Peter11,DiCarlo James E.13,Doong Judy13,Dunn Jessilyn13,Feinberg Jason I.12,Fernandez Christopher12,Floria Charlotte E.12,Gladowski David12,Hadidi Pasha13,Ishizuka Isabel12,Jabbari Javaneh12,Lau Calvin Y. L.13,Lee Pablo A.13,Li Sean13,Lin Denise12,Linder Matthias E.12,Ling Jonathan13,Liu Jaime13,Liu Jonathan13,London Mariya12,Ma Henry13,Mao Jessica13,McDade Jessica E.13,McMillan Alexandra12,Moore Aaron M.12,Oh Won Chan13,Ouyang Yu13,Patel Ruchi13,Paul Marina12,Paulsen Laura C.13,Qiu Judy13,Rhee Alex13,Rubashkin Matthew G.13,Soh Ina Y.12,Sotuyo Nathaniel E.12,Srinivas Venkatesh13,Suarez Allison13,Wong Andy13,Wong Remus13,Xie Wei Rose12,Xu Yijie13,Yu Allen T.12,Koszul Romain34,Bader Joel S.26,Boeke Jef D.2511,Chandrasegaran Srinivasan1

Affiliation:

1. Department of Environmental Health Sciences, Johns Hopkins University (JHU) School of Public Health, Baltimore, MD 21205, USA.

2. High Throughput Biology Center, JHU School of Medicine, Baltimore, MD 21205, USA.

3. Group Spatial Regulation of Genomes, Department of Genomes Genetics, Institut Pasteur, F-75015 Paris, France.

4. CNRS, UMR 3525, F-75015 Paris, France.

5. New York University Langone Medical Center, New York, NY 10016, USA.

6. Department of Biomedical Engineering and Institute of Genetic Medicine, Whiting School of Engineering, JHU, Baltimore, MD 21218, USA.

7. Biological Sciences, Research and Exploratory Development Department, JHU Applied Physics Laboratory, Laurel, MD 20723, USA.

8. Department of Biology, Loyola University Maryland, Baltimore, MD 21210, USA.

9. University of Edinburgh, Edinburgh, Scotland, UK.

10. Carnegie Institution of Washington, Baltimore, MD 21218, USA.

11. Department of Biology, JHU, Baltimore, MD 21218, USA.

12. Krieger School of Arts and Sciences, JHU, Baltimore, MD 21218, USA.

13. Whiting School of Engineering, JHU, Baltimore, MD 21218, USA.

14. Pondicherry Biotech Private Limited, Pillaichavady, Puducherry 605014, India.

15. Sorbonne Universités, Université Pierre et Marie Curie, Univ Paris 06, UMR 7238, Génomique des Microorganismes, F-75005 Paris, France.

16. CNRS, UMR7238, Génomique des Microorganismes, F-75005 Paris, France.

Abstract

Designer Chromosome One of the ultimate aims of synthetic biology is to build designer organisms from the ground up. Rapid advances in DNA synthesis has allowed the assembly of complete bacterial genomes. Eukaryotic organisms, with their generally much larger and more complex genomes, present an additional challenge to synthetic biologists. Annaluru et al. (p. 55 , published online 27 March) designed a synthetic eukaryotic chromosome based on yeast chromosome III. The designer chromosome, shorn of destabilizing transfer RNA genes and transposons, is ∼14% smaller than its wild-type template and is fully functional with every gene tagged for easy removal.

Publisher

American Association for the Advancement of Science (AAAS)

Subject

Multidisciplinary

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