Structural Insight into Nascent Polypeptide Chain–Mediated Translational Stalling

Author:

Seidelt Birgit1,Innis C. Axel2,Wilson Daniel N.1,Gartmann Marco1,Armache Jean-Paul1,Villa Elizabeth34,Trabuco Leonardo G.34,Becker Thomas1,Mielke Thorsten5,Schulten Klaus346,Steitz Thomas A.27,Beckmann Roland1

Affiliation:

1. Gene Center and Center for Integrated Protein Science Munich (CIPSM), Department for Chemistry and Biochemistry, University of Munich, Feodor-Lynen-Strasse 25, 81377 Munich, Germany.

2. Department of Molecular Biophysics and Biochemistry, Howard Hughes Medical Institute and Yale University, New Haven, CT 06520, USA.

3. Beckman Institute, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA.

4. Center for Biophysics and Computational Biology, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA.

5. UltraStrukturNetzwerk, Max Planck Institute for Molecular Genetics, Ihnestrasse 73, 14195-Berlin, Germany and Institut für Medizinische Physik und Biophysik, Charité, Ziegelstrasse 5-8, 10117 Berlin, Germany.

6. Department of Physics, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA.

7. Department of Chemistry, Yale University, New Haven, CT 06520, USA.

Abstract

Nascent Chains Revealed Detailed analysis of protein translation and translocation across membranes requires the identification and structural analysis of intermediates involved in these processes (see the Perspective by Kampmann and Blobel ). Seidelt et al. (p. 1412 , published online 29 October) report the visualization by cryo-electron microscopy of a nascent polypeptide chain in the tunnel of the ribosome at 5.8 angstroms. This resolution allows analysis of the conformation and distinct contacts of the nascent chain within the ribosomal tunnel, which suggests a mechanism by which translational stalling is induced by this peptide. Protein translocation across cellular membranes involves the Sec61 protein, a component of a protein-conducting channel. Whether Sec61 acts as a monomer or as an oligomer during protein translocation has been unclear. Becker et al. (p. 1369 , published online 29 October) describe active yeast and mammalian ribosome-Sec61 structures that show the Sec61 complex interacting with the ribosome and a nascent secretory protein signal sequence. The analysis unambiguously reveals that the active protein-conducting channel is a single Sec61 copy with its central pore serving as conduit for the nascent polypeptide.

Publisher

American Association for the Advancement of Science (AAAS)

Subject

Multidisciplinary

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