Ghost cytometry

Author:

Ota Sadao123ORCID,Horisaki Ryoichi34,Kawamura Yoko12ORCID,Ugawa Masashi1ORCID,Sato Issei1235,Hashimoto Kazuki26,Kamesawa Ryosuke12ORCID,Setoyama Kotaro1,Yamaguchi Satoko2ORCID,Fujiu Katsuhito2,Waki Kayo2,Noji Hiroyuki27

Affiliation:

1. Thinkcyte Inc., 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8654, Japan.

2. University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8654, Japan.

3. Japan Science and Technology Agency, PRESTO, 4-1-8 Honcho, Kawaguchi-shi, Saitama 332-0012, Japan.

4. Department of Information and Physical Sciences, Graduate School of Information Science and Technology, Osaka University, 1-5 Yamadaoka, Suita, Osaka 565-0871, Japan.

5. RIKEN AIP, Nihonbashi 1-chome Mitsui Building, 1-4-1 Nihonbashi, Chuo-ku, Tokyo 103-0027, Japan.

6. Japan Aerospace Exploration Agency, 6-13-1 Osawa, Mitaka-shi, Tokyo 181-0015, Japan.

7. ImPACT Program, Cabinet Office, Government of Japan, Chiyoda-ku Tokyo 100-8914, Japan.

Abstract

Seeing ghosts In fluorescence-activated cell sorting, characteristic target features are labeled with a specific fluorophore, and cells displaying different fluorophores are sorted. Ota et al. describe a technique called ghost cytometry that allows cell sorting based on the morphology of the cytoplasm, labeled with a single-color fluorophore. The motion of cells relative to a patterned optical structure provides spatial information that is compressed into temporal signals, which are sequentially measured by a single-pixel detector. Images can be reconstructed from this spatial and temporal information, but this is computationally costly. Instead, using machine learning, cells are classified directly from the compressed signals, without reconstructing an image. The method was able to separate morphologically similar cell types in an ultrahigh-speed fluorescence imaging–activated cell sorter. Science , this issue p. 1246

Funder

Japan Science and Technology Agency

Publisher

American Association for the Advancement of Science (AAAS)

Subject

Multidisciplinary

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