Whole-Genome Shotgun Sequencing of Mitochondria from Ancient Hair Shafts-Reference-Cited by-同舟云学术

Whole-Genome Shotgun Sequencing of Mitochondria from Ancient Hair Shafts

Published:2007-09-28 Issue:5846 Volume:317 Page:1927-1930
ISSN:0036-8075
Container-title:Science
language:en
Short-container-title:Science

Author:

Gilbert M. Thomas P.¹²³⁴⁵,Tomsho Lynn P.¹²³⁴⁵,Rendulic Snjezana¹²³⁴⁵,Packard Michael¹²³⁴⁵,Drautz Daniela I.¹²³⁴⁵,Sher Andrei¹²³⁴⁵,Tikhonov Alexei¹²³⁴⁵,Dalén Love¹²³⁴⁵,Kuznetsova Tatyana¹²³⁴⁵,Kosintsev Pavel¹²³⁴⁵,Campos Paula F.¹²³⁴⁵,Higham Thomas¹²³⁴⁵,Collins Matthew J.¹²³⁴⁵,Wilson Andrew S.¹²³⁴⁵,Shidlovskiy Fyodor¹²³⁴⁵,Buigues Bernard¹²³⁴⁵,Ericson Per G. P.¹²³⁴⁵,Germonpré Mietje¹²³⁴⁵,Götherström Anders¹²³⁴⁵,Iacumin Paola¹²³⁴⁵,Nikolaev Vladimir¹²³⁴⁵,Nowak-Kemp Malgosia¹²³⁴⁵,Willerslev Eske¹²³⁴⁵,Knight James R.¹²³⁴⁵,Irzyk Gerard P.¹²³⁴⁵,Perbost Clotilde S.¹²³⁴⁵,Fredrikson Karin M.¹²³⁴⁵,Harkins Timothy T.¹²³⁴⁵,Sheridan Sharon¹²³⁴⁵,Miller Webb¹²³⁴⁵,Schuster Stephan C.¹²³⁴⁵

Affiliation:

1. Centre for Ancient Genetics, University of Copenhagen, Universitetsparken 15, DK-2100 Copenhagen, Denmark.

2. Center for Comparative Genomics and Bioinformatics, Pennsylvania State University, 310 Wartik Building, University Park, PA 16802, USA.

3. Severtsov Institute of Ecology and Evolution, Russian Academy of Sciences, 33 Leninsky Prospect, Moscow 119071, Russia.

4. Zoological Institute, Russian Academy of Sciences, Universitetskaya Naberezhnaya, St. Petersburg 199034, Russia.

5. Centro UCM-ISCIII de Evolución y Comportamiento Humanos, c/Sinesio Delgado 4, 28029 Madrid, Spain.

Abstract

Although the application of sequencing-by-synthesis techniques to DNA extracted from bones has revolutionized the study of ancient DNA, it has been plagued by large fractions of contaminating environmental DNA. The genetic analyses of hair shafts could be a solution: We present 10 previously unexamined Siberian mammoth ( Mammuthus primigenius ) mitochondrial genomes, sequenced with up to 48-fold coverage. The observed levels of damage-derived sequencing errors were lower than those observed in previously published frozen bone samples, even though one of the specimens was >50,000 14 C years old and another had been stored for 200 years at room temperature. The method therefore sets the stage for molecular-genetic analysis of museum collections.

Publisher

American Association for the Advancement of Science (AAAS)

Subject

Multidisciplinary

Reference26 articles.

1. Rates of Evolution in Ancient DNA from Adélie Penguins

2. Rise and Fall of the Beringian Steppe Bison

3. Genetic Structure and Extinction of the Woolly Mammoth, Mammuthus primigenius

4. DNA sequences from the quagga, an extinct member of the horse family

5. Complete mitochondrial genome sequences of two extinct moas clarify ratite evolution

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