Design of structurally distinct proteins using strategies inspired by evolution

Author:

Jacobs T. M.1,Williams B.2,Williams T.2,Xu X.34,Eletsky A.34,Federizon J. F.3,Szyperski T.3,Kuhlman B.25

Affiliation:

1. Program in Bioinformatics and Computational Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA.

2. Department of Biochemistry and Biophysics, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA.

3. Department of Chemistry, State University of New York at Buffalo, Buffalo, NY 14260, USA.

4. Northeast Structural Genomics Consortium.

5. Lineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA.

Abstract

Building new proteins from the old Proteins are the workhorses of biology. Designing new, stable proteins with functions desirable in biotechnology or biomedicine remains challenging. Jacobs et al. developed a computational method called SEWING that designs proteins using pieces of existing structures (see the Perspective by Netzer and Fleishman). The new proteins can contain structural features such as pockets or grooves that are required for function. The solved structures of two designed proteins agreed well with the design models. The method allows rapid design of a diverse set of structures that will facilitate functional design. Science , this issue p. 687 ; see also p. 657

Funder

NIH

Publisher

American Association for the Advancement of Science (AAAS)

Subject

Multidisciplinary

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