Dynamic profiling of the protein life cycle in response to pathogens

Author:

Jovanovic Marko1,Rooney Michael S.12,Mertins Philipp1,Przybylski Dariusz1,Chevrier Nicolas13,Satija Rahul1,Rodriguez Edwin H.4,Fields Alexander P.4,Schwartz Schraga1,Raychowdhury Raktima1,Mumbach Maxwell R.1,Eisenhaure Thomas15,Rabani Michal1,Gennert Dave1,Lu Diana1,Delorey Toni1,Weissman Jonathan S.46,Carr Steven A.1,Hacohen Nir157,Regev Aviv189

Affiliation:

1. The Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.

2. Division of Health Sciences and Technology, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.

3. Harvard Faculty of Arts and Sciences Center for Systems Biology, Harvard University, Cambridge, MA 02138, USA.

4. Department of Cellular and Molecular Pharmacology, California Institute for Quantitative Biomedical Research, University of California, San Francisco, San Francisco, CA 94158, USA.

5. Center for Immunology and Inflammatory Diseases, Massachusetts General Hospital, Boston, MA 02114, USA.

6. Howard Hughes Medical Institute (HHMI), University of California, San Francisco, San Francisco, CA 94158, USA.

7. Harvard Medical School, Boston, MA 02115, USA.

8. Department of Biology, Massachusetts Institute of Technology, Cambridge, MA 02140, USA.

9. HHMI, Department of Biology, Massachusetts Institute of Technology, Cambridge, MA 02140, USA.

Abstract

How the immune system readies for battle Although gene expression is tightly controlled at both the RNA and protein levels, the quantitative contribution of each step, especially during dynamic responses, remains largely unknown. Indeed, there has been much debate whether changes in RNA level contribute substantially to protein-level regulation. Jovanovic et al. built a genome-scale model of the temporal dynamics of differential protein expression during the stimulation of immunological dendritic cells (see the Perspective by Li and Biggin). Newly stimulated functions involved the up-regulation of specific RNAs and concomitant increases in the levels of the proteins they encode, whereas housekeeping functions were regulated posttranscriptionally at the protein level. Science , this issue 10.1126/science.1259038 ; see also p. 1066

Funder

NIH

HHMI

Swiss National Science Foundation

National Human Genome Research Institute Centers of Excellence in Genomics Science

Broad Institute Funds

Klarman Cell Observatory

Marie Sklodowska-Curie International Outgoing Fellowships

Publisher

American Association for the Advancement of Science (AAAS)

Subject

Multidisciplinary

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