Autonomous, multiproperty-driven molecular discovery: From predictions to measurements and back

Author:

Koscher Brent A.1ORCID,Canty Richard B.1ORCID,McDonald Matthew A.1ORCID,Greenman Kevin P.1ORCID,McGill Charles J.1,Bilodeau Camille L.1ORCID,Jin Wengong2,Wu Haoyang1ORCID,Vermeire Florence H.1ORCID,Jin Brooke1ORCID,Hart Travis1ORCID,Kulesza Timothy1,Li Shih-Cheng1ORCID,Jaakkola Tommi S.3ORCID,Barzilay Regina3ORCID,Gómez-Bombarelli Rafael4ORCID,Green William H.1ORCID,Jensen Klavs F.1ORCID

Affiliation:

1. Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, MA, USA.

2. Broad Institute of MIT and Harvard, Cambridge, MA, USA.

3. Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Cambridge, MA, USA.

4. Department of Materials Science and Engineering, Massachusetts Institute of Technology, Cambridge, MA, USA.

Abstract

A closed-loop, autonomous molecular discovery platform driven by integrated machine learning tools was developed to accelerate the design of molecules with desired properties. We demonstrated two case studies on dye-like molecules, targeting absorption wavelength, lipophilicity, and photooxidative stability. In the first study, the platform experimentally realized 294 unreported molecules across three automatic iterations of molecular design-make-test-analyze cycles while exploring the structure-function space of four rarely reported scaffolds. In each iteration, the property prediction models that guided exploration learned the structure-property space of diverse scaffold derivatives, which were realized with multistep syntheses and a variety of reactions. The second study exploited property models trained on the explored chemical space and previously reported molecules to discover nine top-performing molecules within a lightly explored structure-property space.

Publisher

American Association for the Advancement of Science (AAAS)

Subject

Multidisciplinary

Cited by 3 articles. 订阅此论文施引文献 订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献

1. Opportunities and Challenges for Machine Learning-Assisted Enzyme Engineering;ACS Central Science;2024-02-05

2. Mixtures Recomposition by Neural Nets: A Multidisciplinary Overview;Journal of Chemical Information and Modeling;2024-01-29

3. Chemprop: A Machine Learning Package for Chemical Property Prediction;Journal of Chemical Information and Modeling;2023-12-26

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