Pervasive functional translation of noncanonical human open reading frames

Author:

Chen Jin12ORCID,Brunner Andreas-David3ORCID,Cogan J. Zachery12,Nuñez James K.12ORCID,Fields Alexander P.12,Adamson Britt12ORCID,Itzhak Daniel N.4ORCID,Li Jason Y.4,Mann Matthias35ORCID,Leonetti Manuel D.4ORCID,Weissman Jonathan S.12ORCID

Affiliation:

1. Department of Cellular and Molecular Pharmacology, University of California, San Francisco, CA 94158, USA.

2. Howard Hughes Medical Institute, University of California, San Francisco, CA 94158, USA.

3. Department of Proteomics and Signal Transduction, Max Planck Institute of Biochemistry, Martinsried 82152, Germany.

4. Cell Atlas Initiative, Chan Zuckerberg Biohub, San Francisco, CA 94158, USA.

5. Clinical Proteomics Group, Proteomics Program, Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Copenhagen 2200, Denmark.

Abstract

Expanding the human proteome Using mass spectrometry, ribosome profiling, and several CRISPR-based screens, Chen et al. identified hundreds of previously uncharacterized functional micropeptides in the human genome (see the Perspective by Wei and Guo). Protein translation outside of annotated open reading frames (ORFs) in messenger RNAs and within ORFs in long noncoding RNAs is pervasive. A functional screen using CRISPR-Cas9 with single-cell transcriptomics suggested critical roles for hundreds of micropeptides. Micropeptides encoded by multiple short, upstream ORFs form stable protein complexes with the downstream canonical proteins encoded on the same messenger RNAs. Science , this issue p. 1140 ; see also p. 1074

Funder

Howard Hughes Medical Institute

NIH Office of the Director

Jane Coffin Childs Memorial Fund for Medical Research

Defense Sciences Office, DARPA

Chan Zuckerberg Biohub

Publisher

American Association for the Advancement of Science (AAAS)

Subject

Multidisciplinary

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