Mapping the malaria parasite druggable genome by using in vitro evolution and chemogenomics

Author:

Cowell Annie N.1ORCID,Istvan Eva S.2ORCID,Lukens Amanda K.34ORCID,Gomez-Lorenzo Maria G.5ORCID,Vanaerschot Manu6ORCID,Sakata-Kato Tomoyo3,Flannery Erika L.1,Magistrado Pamela3,Owen Edward7,Abraham Matthew1ORCID,LaMonte Gregory1,Painter Heather J.7,Williams Roy M.1ORCID,Franco Virginia5,Linares Maria5ORCID,Arriaga Ignacio5,Bopp Selina3ORCID,Corey Victoria C.1,Gnädig Nina F.6ORCID,Coburn-Flynn Olivia6,Reimer Christin1,Gupta Purva1,Murithi James M.6ORCID,Moura Pedro A.6,Fuchs Olivia1ORCID,Sasaki Erika1ORCID,Kim Sang W.1,Teng Christine H.1,Wang Lawrence T.1,Akidil Aslı8,Adjalley Sophie8,Willis Paul A.9,Siegel Dionicio10,Tanaseichuk Olga11ORCID,Zhong Yang11,Zhou Yingyao11,Llinás Manuel7ORCID,Ottilie Sabine1,Gamo Francisco-Javier5,Lee Marcus C. S.68ORCID,Goldberg Daniel E.2ORCID,Fidock David A.612ORCID,Wirth Dyann F.34ORCID,Winzeler Elizabeth A.110ORCID

Affiliation:

1. School of Medicine, University of California San Diego (UCSD), 9500 Gilman Drive, La Jolla, CA 92093, USA.

2. Departments of Medicine and Molecular Microbiology, Washington University School of Medicine, St. Louis, MO 63110, USA.

3. Department of Immunology and Infectious Disease, Harvard T.H. Chan School of Public Health, 665 Huntington Avenue, Boston, MA 02115, USA.

4. Infectious Disease Program, The Broad Institute, 415 Main Street, Cambridge, MA 02142, USA.

5. Tres Cantos Medicines Development Campus, Malaria Discovery Performance Unit, GlaxoSmithKline, Severo Ochoa 2, Tres Cantos 28760, Madrid, Spain.

6. Department of Microbiology and Immunology, Columbia University College of Physicians and Surgeons, New York, NY 10032, USA.

7. Department of Biochemistry and Molecular Biology, Pennsylvania State University, University Park, PA 16802, USA.

8. Malaria Programme, Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SA, UK.

9. Medicines for Malaria Venture, Post Office Box 1826, 20 Route de Pre-Bois, 1215 Geneva 15, Switzerland.

10. Skaggs School of Pharmacy and Pharmaceutical Sciences, UCSD, 9500 Gilman Drive, La Jolla, CA 92093, USA.

11. Genomics Institute of the Novartis Research Foundation, 10675 John J Hopkins Drive, San Diego, CA 92121, USA.

12. Division of Infectious Diseases, Columbia University College of Physicians and Surgeons, New York, NY 10032, USA.

Abstract

Dissecting Plasmodium drug resistance Malaria is a deadly disease with no effective vaccine. Physicians thus depend on antimalarial drugs to save lives, but such compounds are often rendered ineffective when parasites evolve resistance. Cowell et al. systematically studied patterns of Plasmodium falciparum genome evolution by analyzing the sequences of clones that were resistant to diverse antimalarial compounds across the P. falciparum life cycle (see the Perspective by Carlton). The findings identify hitherto unrecognized drug targets and drug-resistance genes, as well as additional alleles in known drug-resistance genes. Science , this issue p. 191 ; see also p. 159

Funder

National Institutes of Health

National Institute of General Medical Sciences

National Institute of Allergy and Infectious Diseases

Bill and Melinda Gates Foundation

Publisher

American Association for the Advancement of Science (AAAS)

Subject

Multidisciplinary

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