Phylogenomics reveals multiple losses of nitrogen-fixing root nodule symbiosis

Author:

Griesmann Maximilian12ORCID,Chang Yue34ORCID,Liu Xin34ORCID,Song Yue34ORCID,Haberer Georg2ORCID,Crook Matthew B.5ORCID,Billault-Penneteau Benjamin1ORCID,Lauressergues Dominique6,Keller Jean6ORCID,Imanishi Leandro7,Roswanjaya Yuda Purwana8ORCID,Kohlen Wouter8ORCID,Pujic Petar9ORCID,Battenberg Kai10,Alloisio Nicole9ORCID,Liang Yuhu34ORCID,Hilhorst Henk11ORCID,Salgado Marco G.12ORCID,Hocher Valerie13ORCID,Gherbi Hassen13ORCID,Svistoonoff Sergio13ORCID,Doyle Jeff J.14ORCID,He Shixu34ORCID,Xu Yan34ORCID,Xu Shanyun34ORCID,Qu Jing34ORCID,Gao Qiang315ORCID,Fang Xiaodong315,Fu Yuan34ORCID,Normand Philippe9ORCID,Berry Alison M.10ORCID,Wall Luis G.7ORCID,Ané Jean-Michel1617ORCID,Pawlowski Katharina12ORCID,Xu Xun34ORCID,Yang Huanming318ORCID,Spannagl Manuel2ORCID,Mayer Klaus F. X.219ORCID,Wong Gane Ka-Shu32021ORCID,Parniske Martin1ORCID,Delaux Pierre-Marc6ORCID,Cheng Shifeng34ORCID

Affiliation:

1. Faculty of Biology, Genetics, LMU Munich, Großhaderner Strasse 2-4, 82152 Martinsried, Germany.

2. Plant Genome and Systems Biology (PGSB), Helmholtz Center Munich–German Research Center for Environmental Health, 85764 Neuherberg, Germany.

3. BGI-Shenzhen, Shenzhen 518083, China.

4. China National GeneBank, BGI-Shenzhen, Shenzhen 518120, China.

5. Department of Microbiology, Weber State University, Ogden, UT 84408-2506, USA.

6. Laboratoire de Recherche en Sciences Végétales (LRSV), Université de Toulouse, CNRS, UPS, 24 chemin de Borde Rouge, Auzeville, BP42617, 31326 Castanet Tolosan, France.

7. LBMIBS, Departamento de Ciencia y Tecnología, Universidad Nacional de Quilmes, CONICET, R. Saénz Peña 352, B1876BXD Bernal, Argentina.

8. Laboratory for Molecular Biology, Wageningen University, Droevendaalsesteeg 1, 6708 PB Wageningen, Netherlands.

9. Université Lyon 1, Université de Lyon, CNRS, Ecologie Microbienne, UMR 5557, Villeurbanne, 69622 Cedex, France.

10. Department of Plant Sciences, University of California, Davis, Davis, CA 95616, USA.

11. Laboratory for Plant Physiology, Wageningen University, Droevendaalsesteeg 1, 6708 PB Wageningen, Netherlands.

12. Department of Ecology, Environment and Plant Sciences, Stockholm University, 106 91 Stockholm, Sweden.

13. French National Research Institute for Sustainable Development (IRD), UMR LSTM (IRD–INRA–CIRAD–Université Montpellier–Supagro), Campus International de Baillarguet, TA A-82/J, 34398, Montpellier Cedex 5, France.

14. Section of Plant Breeding and Genetics, School of Integrated Plant Science, Cornell University, Ithaca, NY 14853, USA.

15. BGI Genomics, BGI-Shenzhen, Shenzhen 518083, China.

16. Department of Agronomy, University of Wisconsin–Madison, Madison, WI 53706, USA.

17. Department of Bacteriology, University of Wisconsin–Madison, Madison, WI 53706, USA.

18. James D. Watson Institute of Genome Sciences, Hangzhou 310058, China.

19. TUM School of Life Sciences Weihenstephan, Technical University of Munich, 85354 Freising, Germany.

20. Department of Biological Sciences, University of Alberta, Edmonton, AB T6G 2E9, Canada.

21. Department of Medicine, University of Alberta, Edmonton, AB T6G 2E, Canada.

Funder

National Science Foundation

European Research Council

Deutsche Forschungsgemeinschaft

Agence Nationale de la Recherche

United States Department of Agriculture

ECOS-SUD

Shenzhen Municipal Government of China

NWO-VENI

German Ministry of Education and Research grant

Swedish Research Council Vetenskapsrådet

National University of Quilmes

Consejo Nacional de Investigaciones Científicas y Técnicas

USDA-NIFA590

Publisher

American Association for the Advancement of Science (AAAS)

Subject

Multidisciplinary

Reference102 articles.

1. Distribution of nitrogen fixation and nitrogenase-like sequences amongst microbial genomes

2. Future Prospects for Cereals That Fix Nitrogen

3. Über die Bedeutung der Wurzelknöllchen von Alnus glutinosa für die Stickstoffernährung dieser Pflanze;Hiltner L.;Landw. Versuchsstat,1895

4. H. Hellriegel H. Wilfarth Untersuchungen über die Stickstoffnahrung der Gramineen und Leguminosen (Buchdruckerei der Post Kayssler Berlin 1888).

5. Chloroplast gene sequence data suggest a single origin of the predisposition for symbiotic nitrogen fixation in angiosperms.

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