Exonic Transcription Factor Binding Directs Codon Choice and Affects Protein Evolution-Reference-Cited by-同舟云学术

Exonic Transcription Factor Binding Directs Codon Choice and Affects Protein Evolution

Published:2013-12-13 Issue:6164 Volume:342 Page:1367-1372
ISSN:0036-8075
Container-title:Science
language:en
Short-container-title:Science

Author:

Stergachis Andrew B.¹,Haugen Eric¹,Shafer Anthony¹,Fu Wenqing¹,Vernot Benjamin¹,Reynolds Alex¹,Raubitschek Anthony²³,Ziegler Steven³,LeProust Emily M.⁴,Akey Joshua M.¹,Stamatoyannopoulos John A.¹⁵

Affiliation:

1. Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA.

2. Department of Immunology, University of Washington, Seattle, WA 98109, USA.

3. Benaroya Research Institute, Seattle, WA 98101, USA.

4. Agilent Technologies, Santa Clara, CA 95051, USA.

5. Department of Medicine, University of Washington, Seattle, WA 98195, USA.

Publisher

American Association for the Advancement of Science (AAAS)

Subject

Multidisciplinary

Reference62 articles.

1. Codon catalog usage and the genome hypothesis

2. Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes: A proposal for a synonymous codon choice that is optimal for the E. coli translational system

3. Codon catalog usage is a genome strategy modulated for gene expressivity

4. Codon usage in bacteria: correlation with gene expressivity

5. Reduced synonymous substitution rate at the start of enterobacterial genes

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